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OR2T10 (olfactory receptor family 2 subfamily T member 10)

Identity

Alias_namesolfactory receptor, family 2, subfamily T, member 10
Other aliasOR1-64
HGNC (Hugo) OR2T10
LocusID (NCBI) 127069
Atlas_Id 71278
Location 1q44  [Link to chromosome band 1q44]
Location_base_pair Starts at 248592830 and ends at 248593768 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR2T10   19573
Cards
Entrez_Gene (NCBI)OR2T10  127069  olfactory receptor family 2 subfamily T member 10
AliasesOR1-64
GeneCards (Weizmann)OR2T10
Ensembl hg19 (Hinxton)ENSG00000184022 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000184022 [Gene_View]  chr1:248592830-248593768 [Contig_View]  OR2T10 [Vega]
ICGC DataPortalENSG00000184022
TCGA cBioPortalOR2T10
AceView (NCBI)OR2T10
Genatlas (Paris)OR2T10
WikiGenes127069
SOURCE (Princeton)OR2T10
Genetics Home Reference (NIH)OR2T10
Genomic and cartography
GoldenPath hg38 (UCSC)OR2T10  -     chr1:248592830-248593768 -  1q44   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR2T10  -     1q44   [Description]    (hg19-Feb_2009)
EnsemblOR2T10 - 1q44 [CytoView hg19]  OR2T10 - 1q44 [CytoView hg38]
Mapping of homologs : NCBIOR2T10 [Mapview hg19]  OR2T10 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC136937 BC136940
RefSeq transcript (Entrez)NM_001004693
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR2T10
Cluster EST : UnigeneHs.553585 [ NCBI ]
CGAP (NCI)Hs.553585
Alternative Splicing GalleryENSG00000184022
Gene ExpressionOR2T10 [ NCBI-GEO ]   OR2T10 [ EBI - ARRAY_EXPRESS ]   OR2T10 [ SEEK ]   OR2T10 [ MEM ]
Gene Expression Viewer (FireBrowse)OR2T10 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)127069
GTEX Portal (Tissue expression)OR2T10
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGZ9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGZ9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGZ9
Splice isoforms : SwissVarQ8NGZ9
PhosPhoSitePlusQ8NGZ9
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR2T10
DMDM Disease mutations127069
Blocks (Seattle)OR2T10
SuperfamilyQ8NGZ9
Human Protein AtlasENSG00000184022
Peptide AtlasQ8NGZ9
HPRD14950
IPIIPI00169230   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGZ9
IntAct (EBI)Q8NGZ9
FunCoupENSG00000184022
BioGRIDOR2T10
STRING (EMBL)OR2T10
ZODIACOR2T10
Ontologies - Pathways
QuickGOQ8NGZ9
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR2T10
Atlas of Cancer Signalling NetworkOR2T10
Wikipedia pathwaysOR2T10
Orthology - Evolution
OrthoDB127069
GeneTree (enSembl)ENSG00000184022
Phylogenetic Trees/Animal Genes : TreeFamOR2T10
HOVERGENQ8NGZ9
HOGENOMQ8NGZ9
Homologs : HomoloGeneOR2T10
Homology/Alignments : Family Browser (UCSC)OR2T10
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR2T10 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR2T10
dbVarOR2T10
ClinVarOR2T10
1000_GenomesOR2T10 
Exome Variant ServerOR2T10
ExAC (Exome Aggregation Consortium)OR2T10 (select the gene name)
Genetic variants : HAPMAP127069
Genomic Variants (DGV)OR2T10 [DGVbeta]
DECIPHEROR2T10 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR2T10 
Mutations
ICGC Data PortalOR2T10 
TCGA Data PortalOR2T10 
Broad Tumor PortalOR2T10
OASIS PortalOR2T10 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR2T10  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR2T10
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR2T10
DgiDB (Drug Gene Interaction Database)OR2T10
DoCM (Curated mutations)OR2T10 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR2T10 (select a term)
intoGenOR2T10
Cancer3DOR2T10(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR2T10
Genetic Testing Registry OR2T10
NextProtQ8NGZ9 [Medical]
TSGene127069
GENETestsOR2T10
Target ValidationOR2T10
Huge Navigator OR2T10 [HugePedia]
snp3D : Map Gene to Disease127069
BioCentury BCIQOR2T10
ClinGenOR2T10
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD127069
Chemical/Pharm GKB GenePA134982857
Clinical trialOR2T10
Miscellaneous
canSAR (ICR)OR2T10 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR2T10
EVEXOR2T10
GoPubMedOR2T10
iHOPOR2T10
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:34:10 CEST 2017

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