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OR2T29 (olfactory receptor family 2 subfamily T member 29)

Identity

Alias_namesolfactory receptor, family 2, subfamily T, member 29
Other alias-
HGNC (Hugo) OR2T29
LocusID (NCBI) 343563
Atlas_Id 71283
Location 1q44  [Link to chromosome band 1q44]
Location_base_pair Starts at 248558544 and ends at 248559491 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR2T29   31253
Cards
Entrez_Gene (NCBI)OR2T29  343563  olfactory receptor family 2 subfamily T member 29
Aliases
GeneCards (Weizmann)OR2T29
Ensembl hg19 (Hinxton)ENSG00000182783 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000182783 [Gene_View]  chr1:248558544-248559491 [Contig_View]  OR2T29 [Vega]
ICGC DataPortalENSG00000182783
TCGA cBioPortalOR2T29
AceView (NCBI)OR2T29
Genatlas (Paris)OR2T29
WikiGenes343563
SOURCE (Princeton)OR2T29
Genetics Home Reference (NIH)OR2T29
Genomic and cartography
GoldenPath hg38 (UCSC)OR2T29  -     chr1:248558544-248559491 -  1q44   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR2T29  -     1q44   [Description]    (hg19-Feb_2009)
EnsemblOR2T29 - 1q44 [CytoView hg19]  OR2T29 - 1q44 [CytoView hg38]
Mapping of homologs : NCBIOR2T29 [Mapview hg19]  OR2T29 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001004694
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR2T29
Cluster EST : UnigeneHs.553707 [ NCBI ]
CGAP (NCI)Hs.553707
Alternative Splicing GalleryENSG00000182783
Gene ExpressionOR2T29 [ NCBI-GEO ]   OR2T29 [ EBI - ARRAY_EXPRESS ]   OR2T29 [ SEEK ]   OR2T29 [ MEM ]
Gene Expression Viewer (FireBrowse)OR2T29 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)343563
GTEX Portal (Tissue expression)OR2T29
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NH02   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NH02  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NH02
Splice isoforms : SwissVarQ8NH02
PhosPhoSitePlusQ8NH02
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR2T29
DMDM Disease mutations343563
Blocks (Seattle)OR2T29
SuperfamilyQ8NH02
Human Protein AtlasENSG00000182783
Peptide AtlasQ8NH02
HPRD17707
IPIIPI00259413   
Protein Interaction databases
DIP (DOE-UCLA)Q8NH02
IntAct (EBI)Q8NH02
FunCoupENSG00000182783
BioGRIDOR2T29
STRING (EMBL)OR2T29
ZODIACOR2T29
Ontologies - Pathways
QuickGOQ8NH02
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR2T29
Atlas of Cancer Signalling NetworkOR2T29
Wikipedia pathwaysOR2T29
Orthology - Evolution
OrthoDB343563
GeneTree (enSembl)ENSG00000182783
Phylogenetic Trees/Animal Genes : TreeFamOR2T29
HOVERGENQ8NH02
HOGENOMQ8NH02
Homologs : HomoloGeneOR2T29
Homology/Alignments : Family Browser (UCSC)OR2T29
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR2T29 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR2T29
dbVarOR2T29
ClinVarOR2T29
1000_GenomesOR2T29 
Exome Variant ServerOR2T29
ExAC (Exome Aggregation Consortium)OR2T29 (select the gene name)
Genetic variants : HAPMAP343563
Genomic Variants (DGV)OR2T29 [DGVbeta]
DECIPHEROR2T29 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR2T29 
Mutations
ICGC Data PortalOR2T29 
TCGA Data PortalOR2T29 
Broad Tumor PortalOR2T29
OASIS PortalOR2T29 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR2T29  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR2T29
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR2T29
DgiDB (Drug Gene Interaction Database)OR2T29
DoCM (Curated mutations)OR2T29 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR2T29 (select a term)
intoGenOR2T29
Cancer3DOR2T29(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR2T29
Genetic Testing Registry OR2T29
NextProtQ8NH02 [Medical]
TSGene343563
GENETestsOR2T29
Target ValidationOR2T29
Huge Navigator OR2T29 [HugePedia]
snp3D : Map Gene to Disease343563
BioCentury BCIQOR2T29
ClinGenOR2T29
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD343563
Chemical/Pharm GKB GenePA134876557
Clinical trialOR2T29
Miscellaneous
canSAR (ICR)OR2T29 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR2T29
EVEXOR2T29
GoPubMedOR2T29
iHOPOR2T29
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:33:03 CEST 2017

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