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OR2T33 (olfactory receptor family 2 subfamily T member 33)

Identity

Alias_namesolfactory receptor, family 2, subfamily T, member 33
Other aliasOR1-56
HGNC (Hugo) OR2T33
LocusID (NCBI) 391195
Atlas_Id 71285
Location 1q44  [Link to chromosome band 1q44]
Location_base_pair Starts at 248272852 and ends at 248273814 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)OR2T33   31255
Cards
Entrez_Gene (NCBI)OR2T33  391195  olfactory receptor family 2 subfamily T member 33
AliasesOR1-56
GeneCards (Weizmann)OR2T33
Ensembl hg19 (Hinxton)ENSG00000177212 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000177212 [Gene_View]  ENSG00000177212 [Sequence]  chr1:248272852-248273814 [Contig_View]  OR2T33 [Vega]
ICGC DataPortalENSG00000177212
TCGA cBioPortalOR2T33
AceView (NCBI)OR2T33
Genatlas (Paris)OR2T33
WikiGenes391195
SOURCE (Princeton)OR2T33
Genetics Home Reference (NIH)OR2T33
Genomic and cartography
GoldenPath hg38 (UCSC)OR2T33  -     chr1:248272852-248273814 -  1q44   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR2T33  -     1q44   [Description]    (hg19-Feb_2009)
EnsemblOR2T33 - 1q44 [CytoView hg19]  OR2T33 - 1q44 [CytoView hg38]
Mapping of homologs : NCBIOR2T33 [Mapview hg19]  OR2T33 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC136994 BC136995
RefSeq transcript (Entrez)NM_001004695
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR2T33
Cluster EST : UnigeneHs.553783 [ NCBI ]
CGAP (NCI)Hs.553783
Alternative Splicing GalleryENSG00000177212
Gene ExpressionOR2T33 [ NCBI-GEO ]   OR2T33 [ EBI - ARRAY_EXPRESS ]   OR2T33 [ SEEK ]   OR2T33 [ MEM ]
Gene Expression Viewer (FireBrowse)OR2T33 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)391195
GTEX Portal (Tissue expression)OR2T33
Human Protein AtlasENSG00000177212-OR2T33 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NG76   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NG76  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NG76
Splice isoforms : SwissVarQ8NG76
PhosPhoSitePlusQ8NG76
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR2T33
DMDM Disease mutations391195
Blocks (Seattle)OR2T33
SuperfamilyQ8NG76
Human Protein Atlas [tissue]ENSG00000177212-OR2T33 [tissue]
Peptide AtlasQ8NG76
HPRD14953
IPIIPI00168933   
Protein Interaction databases
DIP (DOE-UCLA)Q8NG76
IntAct (EBI)Q8NG76
FunCoupENSG00000177212
BioGRIDOR2T33
STRING (EMBL)OR2T33
ZODIACOR2T33
Ontologies - Pathways
QuickGOQ8NG76
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
NDEx NetworkOR2T33
Atlas of Cancer Signalling NetworkOR2T33
Wikipedia pathwaysOR2T33
Orthology - Evolution
OrthoDB391195
GeneTree (enSembl)ENSG00000177212
Phylogenetic Trees/Animal Genes : TreeFamOR2T33
HOVERGENQ8NG76
HOGENOMQ8NG76
Homologs : HomoloGeneOR2T33
Homology/Alignments : Family Browser (UCSC)OR2T33
Gene fusions - Rearrangements
Fusion : QuiverOR2T33
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR2T33 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR2T33
dbVarOR2T33
ClinVarOR2T33
1000_GenomesOR2T33 
Exome Variant ServerOR2T33
ExAC (Exome Aggregation Consortium)ENSG00000177212
GNOMAD BrowserENSG00000177212
Varsome BrowserOR2T33
Genetic variants : HAPMAP391195
Genomic Variants (DGV)OR2T33 [DGVbeta]
DECIPHEROR2T33 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR2T33 
Mutations
ICGC Data PortalOR2T33 
TCGA Data PortalOR2T33 
Broad Tumor PortalOR2T33
OASIS PortalOR2T33 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR2T33  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR2T33
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR2T33
DgiDB (Drug Gene Interaction Database)OR2T33
DoCM (Curated mutations)OR2T33 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR2T33 (select a term)
intoGenOR2T33
Cancer3DOR2T33(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETOR2T33
MedgenOR2T33
Genetic Testing Registry OR2T33
NextProtQ8NG76 [Medical]
TSGene391195
GENETestsOR2T33
Target ValidationOR2T33
Huge Navigator OR2T33 [HugePedia]
snp3D : Map Gene to Disease391195
BioCentury BCIQOR2T33
ClinGenOR2T33
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD391195
Chemical/Pharm GKB GenePA134889138
Clinical trialOR2T33
Miscellaneous
canSAR (ICR)OR2T33 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR2T33
EVEXOR2T33
GoPubMedOR2T33
iHOPOR2T33
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 14:21:36 CEST 2018
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