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OR2T34 (olfactory receptor family 2 subfamily T member 34)

Identity

Alias_namesolfactory receptor, family 2, subfamily T, member 34
Other alias-
HGNC (Hugo) OR2T34
LocusID (NCBI) 127068
Atlas_Id 71286
Location 1q44  [Link to chromosome band 1q44]
Location_base_pair Starts at 248573801 and ends at 248574757 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR2T34   31256
Cards
Entrez_Gene (NCBI)OR2T34  127068  olfactory receptor family 2 subfamily T member 34
Aliases
GeneCards (Weizmann)OR2T34
Ensembl hg19 (Hinxton)ENSG00000183310 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000183310 [Gene_View]  chr1:248573801-248574757 [Contig_View]  OR2T34 [Vega]
ICGC DataPortalENSG00000183310
TCGA cBioPortalOR2T34
AceView (NCBI)OR2T34
Genatlas (Paris)OR2T34
WikiGenes127068
SOURCE (Princeton)OR2T34
Genetics Home Reference (NIH)OR2T34
Genomic and cartography
GoldenPath hg38 (UCSC)OR2T34  -     chr1:248573801-248574757 -  1q44   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR2T34  -     1q44   [Description]    (hg19-Feb_2009)
EnsemblOR2T34 - 1q44 [CytoView hg19]  OR2T34 - 1q44 [CytoView hg38]
Mapping of homologs : NCBIOR2T34 [Mapview hg19]  OR2T34 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC136924 BC136926
RefSeq transcript (Entrez)NM_001001821
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR2T34
Cluster EST : UnigeneHs.553584 [ NCBI ]
CGAP (NCI)Hs.553584
Alternative Splicing GalleryENSG00000183310
Gene ExpressionOR2T34 [ NCBI-GEO ]   OR2T34 [ EBI - ARRAY_EXPRESS ]   OR2T34 [ SEEK ]   OR2T34 [ MEM ]
Gene Expression Viewer (FireBrowse)OR2T34 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)127068
GTEX Portal (Tissue expression)OR2T34
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGX1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGX1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGX1
Splice isoforms : SwissVarQ8NGX1
PhosPhoSitePlusQ8NGX1
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Domain families : Smart (EMBL)7TM_GPCR_Srsx (SM01381)  
Conserved Domain (NCBI)OR2T34
DMDM Disease mutations127068
Blocks (Seattle)OR2T34
SuperfamilyQ8NGX1
Human Protein AtlasENSG00000183310
Peptide AtlasQ8NGX1
HPRD14954
IPIIPI00169184   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGX1
IntAct (EBI)Q8NGX1
FunCoupENSG00000183310
BioGRIDOR2T34
STRING (EMBL)OR2T34
ZODIACOR2T34
Ontologies - Pathways
QuickGOQ8NGX1
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR2T34
Atlas of Cancer Signalling NetworkOR2T34
Wikipedia pathwaysOR2T34
Orthology - Evolution
OrthoDB127068
GeneTree (enSembl)ENSG00000183310
Phylogenetic Trees/Animal Genes : TreeFamOR2T34
HOVERGENQ8NGX1
HOGENOMQ8NGX1
Homologs : HomoloGeneOR2T34
Homology/Alignments : Family Browser (UCSC)OR2T34
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR2T34 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR2T34
dbVarOR2T34
ClinVarOR2T34
1000_GenomesOR2T34 
Exome Variant ServerOR2T34
ExAC (Exome Aggregation Consortium)OR2T34 (select the gene name)
Genetic variants : HAPMAP127068
Genomic Variants (DGV)OR2T34 [DGVbeta]
DECIPHEROR2T34 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR2T34 
Mutations
ICGC Data PortalOR2T34 
TCGA Data PortalOR2T34 
Broad Tumor PortalOR2T34
OASIS PortalOR2T34 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR2T34  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR2T34
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR2T34
DgiDB (Drug Gene Interaction Database)OR2T34
DoCM (Curated mutations)OR2T34 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR2T34 (select a term)
intoGenOR2T34
Cancer3DOR2T34(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR2T34
Genetic Testing Registry OR2T34
NextProtQ8NGX1 [Medical]
TSGene127068
GENETestsOR2T34
Target ValidationOR2T34
Huge Navigator OR2T34 [HugePedia]
snp3D : Map Gene to Disease127068
BioCentury BCIQOR2T34
ClinGenOR2T34
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD127068
Chemical/Pharm GKB GenePA134944535
Clinical trialOR2T34
Miscellaneous
canSAR (ICR)OR2T34 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR2T34
EVEXOR2T34
GoPubMedOR2T34
iHOPOR2T34
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:34:12 CEST 2017

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