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OR2T35 (olfactory receptor family 2 subfamily T member 35)

Identity

Alias_namesolfactory receptor, family 2, subfamily T, member 35
Other alias-
HGNC (Hugo) OR2T35
LocusID (NCBI) 403244
Atlas_Id 71287
Location 1q44  [Link to chromosome band 1q44]
Location_base_pair Starts at 248638287 and ends at 248639258 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR2T35   31257
Cards
Entrez_Gene (NCBI)OR2T35  403244  olfactory receptor family 2 subfamily T member 35
Aliases
GeneCards (Weizmann)OR2T35
Ensembl hg19 (Hinxton)ENSG00000177151 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000177151 [Gene_View]  chr1:248638287-248639258 [Contig_View]  OR2T35 [Vega]
ICGC DataPortalENSG00000177151
TCGA cBioPortalOR2T35
AceView (NCBI)OR2T35
Genatlas (Paris)OR2T35
WikiGenes403244
SOURCE (Princeton)OR2T35
Genetics Home Reference (NIH)OR2T35
Genomic and cartography
GoldenPath hg38 (UCSC)OR2T35  -     chr1:248638287-248639258 -  1q44   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR2T35  -     1q44   [Description]    (hg19-Feb_2009)
EnsemblOR2T35 - 1q44 [CytoView hg19]  OR2T35 - 1q44 [CytoView hg38]
Mapping of homologs : NCBIOR2T35 [Mapview hg19]  OR2T35 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC156815
RefSeq transcript (Entrez)NM_001001827
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR2T35
Cluster EST : UnigeneHs.534846 [ NCBI ]
CGAP (NCI)Hs.534846
Alternative Splicing GalleryENSG00000177151
Gene ExpressionOR2T35 [ NCBI-GEO ]   OR2T35 [ EBI - ARRAY_EXPRESS ]   OR2T35 [ SEEK ]   OR2T35 [ MEM ]
Gene Expression Viewer (FireBrowse)OR2T35 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)403244
GTEX Portal (Tissue expression)OR2T35
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGX2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGX2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGX2
Splice isoforms : SwissVarQ8NGX2
PhosPhoSitePlusQ8NGX2
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR2T35
DMDM Disease mutations403244
Blocks (Seattle)OR2T35
SuperfamilyQ8NGX2
Human Protein AtlasENSG00000177151
Peptide AtlasQ8NGX2
HPRD17709
IPIIPI00419924   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGX2
IntAct (EBI)Q8NGX2
FunCoupENSG00000177151
BioGRIDOR2T35
STRING (EMBL)OR2T35
ZODIACOR2T35
Ontologies - Pathways
QuickGOQ8NGX2
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
NDEx NetworkOR2T35
Atlas of Cancer Signalling NetworkOR2T35
Wikipedia pathwaysOR2T35
Orthology - Evolution
OrthoDB403244
GeneTree (enSembl)ENSG00000177151
Phylogenetic Trees/Animal Genes : TreeFamOR2T35
HOVERGENQ8NGX2
HOGENOMQ8NGX2
Homologs : HomoloGeneOR2T35
Homology/Alignments : Family Browser (UCSC)OR2T35
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR2T35 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR2T35
dbVarOR2T35
ClinVarOR2T35
1000_GenomesOR2T35 
Exome Variant ServerOR2T35
ExAC (Exome Aggregation Consortium)OR2T35 (select the gene name)
Genetic variants : HAPMAP403244
Genomic Variants (DGV)OR2T35 [DGVbeta]
DECIPHEROR2T35 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR2T35 
Mutations
ICGC Data PortalOR2T35 
TCGA Data PortalOR2T35 
Broad Tumor PortalOR2T35
OASIS PortalOR2T35 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR2T35  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR2T35
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR2T35
DgiDB (Drug Gene Interaction Database)OR2T35
DoCM (Curated mutations)OR2T35 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR2T35 (select a term)
intoGenOR2T35
Cancer3DOR2T35(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR2T35
Genetic Testing Registry OR2T35
NextProtQ8NGX2 [Medical]
TSGene403244
GENETestsOR2T35
Target ValidationOR2T35
Huge Navigator OR2T35 [HugePedia]
snp3D : Map Gene to Disease403244
BioCentury BCIQOR2T35
ClinGenOR2T35
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD403244
Chemical/Pharm GKB GenePA134968902
Clinical trialOR2T35
Miscellaneous
canSAR (ICR)OR2T35 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR2T35
EVEXOR2T35
GoPubMedOR2T35
iHOPOR2T35
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:34:12 CEST 2017

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