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OR2V1 (olfactory receptor, family 2, subfamily V, member 1)

Identity

Alias_namesOR2V1P
olfactory receptor, family 2, subfamily V, member 1
Alias_symbol (synonym)OST265
Other alias
HGNC (Hugo) OR2V1
LocusID (NCBI) 26693
Atlas_Id 71292
Location 5q35.3  [Link to chromosome band 5q35]
Location_base_pair Starts at 180551357 and ends at 180552304 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR2V1   8280
Cards
Entrez_Gene (NCBI)OR2V1  26693  olfactory receptor, family 2, subfamily V, member 1
AliasesOR2V1P; OST265
GeneCards (Weizmann)OR2V1
Ensembl hg19 (Hinxton)ENSG00000185372 [Gene_View]  chr5:180551357-180552304 [Contig_View]  OR2V1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000185372 [Gene_View]  chr5:180551357-180552304 [Contig_View]  OR2V1 [Vega]
ICGC DataPortalENSG00000185372
TCGA cBioPortalOR2V1
AceView (NCBI)OR2V1
Genatlas (Paris)OR2V1
WikiGenes26693
SOURCE (Princeton)OR2V1
Genetics Home Reference (NIH)OR2V1
Genomic and cartography
GoldenPath hg19 (UCSC)OR2V1  -     chr5:180551357-180552304 -  5q35.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)OR2V1  -     5q35.3   [Description]    (hg38-Dec_2013)
EnsemblOR2V1 - 5q35.3 [CytoView hg19]  OR2V1 - 5q35.3 [CytoView hg38]
Mapping of homologs : NCBIOR2V1 [Mapview hg19]  OR2V1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001258283
RefSeq genomic (Entrez)NC_000005 NC_018916 NG_004137 NT_023133 NW_004929325
Consensus coding sequences : CCDS (NCBI)OR2V1
Cluster EST : UnigeneHs.742585 [ NCBI ]
CGAP (NCI)Hs.742585
Alternative Splicing GalleryENSG00000185372
Gene ExpressionOR2V1 [ NCBI-GEO ]   OR2V1 [ EBI - ARRAY_EXPRESS ]   OR2V1 [ SEEK ]   OR2V1 [ MEM ]
Gene Expression Viewer (FireBrowse)OR2V1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)26693
GTEX Portal (Tissue expression)OR2V1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NHB1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NHB1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NHB1
Splice isoforms : SwissVarQ8NHB1
PhosPhoSitePlusQ8NHB1
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR2V1
DMDM Disease mutations26693
Blocks (Seattle)OR2V1
SuperfamilyQ8NHB1
Human Protein AtlasENSG00000185372
Peptide AtlasQ8NHB1
IPIIPI00169241   
Protein Interaction databases
DIP (DOE-UCLA)Q8NHB1
IntAct (EBI)Q8NHB1
FunCoupENSG00000185372
BioGRIDOR2V1
STRING (EMBL)OR2V1
ZODIACOR2V1
Ontologies - Pathways
QuickGOQ8NHB1
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR2V1
Atlas of Cancer Signalling NetworkOR2V1
Wikipedia pathwaysOR2V1
Orthology - Evolution
OrthoDB26693
GeneTree (enSembl)ENSG00000185372
Phylogenetic Trees/Animal Genes : TreeFamOR2V1
HOVERGENQ8NHB1
HOGENOMQ8NHB1
Homologs : HomoloGeneOR2V1
Homology/Alignments : Family Browser (UCSC)OR2V1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR2V1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR2V1
dbVarOR2V1
ClinVarOR2V1
1000_GenomesOR2V1 
Exome Variant ServerOR2V1
ExAC (Exome Aggregation Consortium)OR2V1 (select the gene name)
Genetic variants : HAPMAP26693
Genomic Variants (DGV)OR2V1 [DGVbeta]
DECIPHER (Syndromes)5:180551357-180552304  ENSG00000185372
CONAN: Copy Number AnalysisOR2V1 
Mutations
ICGC Data PortalOR2V1 
TCGA Data PortalOR2V1 
Broad Tumor PortalOR2V1
OASIS PortalOR2V1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR2V1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR2V1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR2V1
DgiDB (Drug Gene Interaction Database)OR2V1
DoCM (Curated mutations)OR2V1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR2V1 (select a term)
intoGenOR2V1
Cancer3DOR2V1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR2V1
Genetic Testing Registry OR2V1
NextProtQ8NHB1 [Medical]
TSGene26693
GENETestsOR2V1
Huge Navigator OR2V1 [HugePedia]
snp3D : Map Gene to Disease26693
BioCentury BCIQOR2V1
ClinGenOR2V1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26693
Chemical/Pharm GKB GenePA32211
Clinical trialOR2V1
Miscellaneous
canSAR (ICR)OR2V1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR2V1
EVEXOR2V1
GoPubMedOR2V1
iHOPOR2V1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:36:29 CET 2017

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