Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors&Óbsp;`&n`sp;Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

OR2V2 (olfactory receptor family 2 subfamily V member 2)

Identity

Alias_namesOR2V3
olfactory receptor, family 2, subfamily V, member 2
Alias_symbol (synonym)OST713
Other alias
HGNC (Hugo) OR2V2
LocusID (NCBI) 285659
Atlas_Id 71293
Location 5q35.3  [Link to chromosome band 5q35]
Location_base_pair Starts at 181154943 and ends at 181155890 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR2V2   15341
Cards
Entrez_Gene (NCBI)OR2V2  285659  olfactory receptor family 2 subfamily V member 2
AliasesOR2V3; OST713
GeneCards (Weizmann)OR2V2
Ensembl hg19 (Hinxton)ENSG00000182613 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000182613 [Gene_View]  chr5:181154943-181155890 [Contig_View]  OR2V2 [Vega]
ICGC DataPortalENSG00000182613
TCGA cBioPortalOR2V2
AceView (NCBI)OR2V2
Genatlas (Paris)OR2V2
WikiGenes285659
SOURCE (Princeton)OR2V2
Genetics Home Reference (NIH)OR2V2
Genomic and cartography
GoldenPath hg38 (UCSC)OR2V2  -     chr5:181154943-181155890 +  5q35.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR2V2  -     5q35.3   [Description]    (hg19-Feb_2009)
EnsemblOR2V2 - 5q35.3 [CytoView hg19]  OR2V2 - 5q35.3 [CytoView hg38]
Mapping of homologs : NCBIOR2V2 [Mapview hg19]  OR2V2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_206880
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR2V2
Cluster EST : UnigeneHs.553681 [ NCBI ]
CGAP (NCI)Hs.553681
Alternative Splicing GalleryENSG00000182613
Gene ExpressionOR2V2 [ NCBI-GEO ]   OR2V2 [ EBI - ARRAY_EXPRESS ]   OR2V2 [ SEEK ]   OR2V2 [ MEM ]
Gene Expression Viewer (FireBrowse)OR2V2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)285659
GTEX Portal (Tissue expression)OR2V2
Human Protein AtlasENSG00000182613-OR2V2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96R30   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96R30  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96R30
Splice isoforms : SwissVarQ96R30
PhosPhoSitePlusQ96R30
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR2V2
DMDM Disease mutations285659
Blocks (Seattle)OR2V2
SuperfamilyQ96R30
Human Protein Atlas [tissue]ENSG00000182613-OR2V2 [tissue]
Peptide AtlasQ96R30
HPRD14956
IPIIPI00382684   
Protein Interaction databases
DIP (DOE-UCLA)Q96R30
IntAct (EBI)Q96R30
FunCoupENSG00000182613
BioGRIDOR2V2
STRING (EMBL)OR2V2
ZODIACOR2V2
Ontologies - Pathways
QuickGOQ96R30
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR2V2
Atlas of Cancer Signalling NetworkOR2V2
Wikipedia pathwaysOR2V2
Orthology - Evolution
OrthoDB285659
GeneTree (enSembl)ENSG00000182613
Phylogenetic Trees/Animal Genes : TreeFamOR2V2
HOVERGENQ96R30
HOGENOMQ96R30
Homologs : HomoloGeneOR2V2
Homology/Alignments : Family Browser (UCSC)OR2V2
Gene fusions - Rearrangements
Tumor Fusion PortalOR2V2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR2V2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR2V2
dbVarOR2V2
ClinVarOR2V2
1000_GenomesOR2V2 
Exome Variant ServerOR2V2
ExAC (Exome Aggregation Consortium)ENSG00000182613
GNOMAD BrowserENSG00000182613
Genetic variants : HAPMAP285659
Genomic Variants (DGV)OR2V2 [DGVbeta]
DECIPHEROR2V2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR2V2 
Mutations
ICGC Data PortalOR2V2 
TCGA Data PortalOR2V2 
Broad Tumor PortalOR2V2
OASIS PortalOR2V2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR2V2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR2V2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR2V2
DgiDB (Drug Gene Interaction Database)OR2V2
DoCM (Curated mutations)OR2V2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR2V2 (select a term)
intoGenOR2V2
Cancer3DOR2V2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETOR2V2
MedgenOR2V2
Genetic Testing Registry OR2V2
NextProtQ96R30 [Medical]
TSGene285659
GENETestsOR2V2
Target ValidationOR2V2
Huge Navigator OR2V2 [HugePedia]
snp3D : Map Gene to Disease285659
BioCentury BCIQOR2V2
ClinGenOR2V2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD285659
Chemical/Pharm GKB GenePA32212
Clinical trialOR2V2
Miscellaneous
canSAR (ICR)OR2V2 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR2V2
EVEXOR2V2
GoPubMedOR2V2
iHOPOR2V2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:12:36 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.