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OR2W5 (olfactory receptor family 2 subfamily W member 5 (gene/pseudogene))

Identity

Alias_namesOR2W5P
olfactory receptor, family 2, subfamily W, member 5
olfactory receptor, family 2, subfamily W, member 5 (gene/pseudogene)
Alias_symbol (synonym)OST722
Other alias
HGNC (Hugo) OR2W5
LocusID (NCBI) 441932
Atlas_Id 71296
Location 1q44  [Link to chromosome band 1q44]
Location_base_pair Starts at 247491068 and ends at 247492409 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR2W5   15424
Cards
Entrez_Gene (NCBI)OR2W5  441932  olfactory receptor family 2 subfamily W member 5 (gene/pseudogene)
AliasesOR2W5P; OST722
GeneCards (Weizmann)OR2W5
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:247491068-247492409 [Contig_View]  OR2W5 [Vega]
TCGA cBioPortalOR2W5
AceView (NCBI)OR2W5
Genatlas (Paris)OR2W5
WikiGenes441932
SOURCE (Princeton)OR2W5
Genetics Home Reference (NIH)OR2W5
Genomic and cartography
GoldenPath hg38 (UCSC)OR2W5  -     chr1:247491068-247492409 +  1q44   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR2W5  -     1q44   [Description]    (hg19-Feb_2009)
EnsemblOR2W5 - 1q44 [CytoView hg19]  OR2W5 - 1q44 [CytoView hg38]
Mapping of homologs : NCBIOR2W5 [Mapview hg19]  OR2W5 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA568210 BC137203 BC137204
RefSeq transcript (Entrez)NM_001004698
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR2W5
Cluster EST : UnigeneHs.591526 [ NCBI ]
CGAP (NCI)Hs.591526
Gene ExpressionOR2W5 [ NCBI-GEO ]   OR2W5 [ EBI - ARRAY_EXPRESS ]   OR2W5 [ SEEK ]   OR2W5 [ MEM ]
Gene Expression Viewer (FireBrowse)OR2W5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)441932
GTEX Portal (Tissue expression)OR2W5
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NFC9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NFC9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NFC9
Splice isoforms : SwissVarA6NFC9
PhosPhoSitePlusA6NFC9
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)7tm_1 (PF00001)   
Domain families : Pfam (NCBI)pfam00001   
Conserved Domain (NCBI)OR2W5
DMDM Disease mutations441932
Blocks (Seattle)OR2W5
SuperfamilyA6NFC9
Peptide AtlasA6NFC9
HPRD17715
IPIIPI00464971   
Protein Interaction databases
DIP (DOE-UCLA)A6NFC9
IntAct (EBI)A6NFC9
BioGRIDOR2W5
STRING (EMBL)OR2W5
ZODIACOR2W5
Ontologies - Pathways
QuickGOA6NFC9
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
NDEx NetworkOR2W5
Atlas of Cancer Signalling NetworkOR2W5
Wikipedia pathwaysOR2W5
Orthology - Evolution
OrthoDB441932
Phylogenetic Trees/Animal Genes : TreeFamOR2W5
HOVERGENA6NFC9
HOGENOMA6NFC9
Homologs : HomoloGeneOR2W5
Homology/Alignments : Family Browser (UCSC)OR2W5
Gene fusions - Rearrangements
Tumor Fusion PortalOR2W5
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR2W5 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR2W5
dbVarOR2W5
ClinVarOR2W5
1000_GenomesOR2W5 
Exome Variant ServerOR2W5
ExAC (Exome Aggregation Consortium)
Genetic variants : HAPMAP441932
Genomic Variants (DGV)OR2W5 [DGVbeta]
DECIPHEROR2W5 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR2W5 
Mutations
ICGC Data PortalOR2W5 
TCGA Data PortalOR2W5 
Broad Tumor PortalOR2W5
OASIS PortalOR2W5 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR2W5  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR2W5
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
BioMutasearch OR2W5
DgiDB (Drug Gene Interaction Database)OR2W5
DoCM (Curated mutations)OR2W5 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR2W5 (select a term)
intoGenOR2W5
Cancer3DOR2W5(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETOR2W5
MedgenOR2W5
Genetic Testing Registry OR2W5
NextProtA6NFC9 [Medical]
TSGene441932
GENETestsOR2W5
Target ValidationOR2W5
Huge Navigator OR2W5 [HugePedia]
snp3D : Map Gene to Disease441932
BioCentury BCIQOR2W5
ClinGenOR2W5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD441932
Chemical/Pharm GKB GenePA32218
Clinical trialOR2W5
Miscellaneous
canSAR (ICR)OR2W5 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR2W5
EVEXOR2W5
GoPubMedOR2W5
iHOPOR2W5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:02:12 CET 2017

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