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OR3A3 (olfactory receptor family 3 subfamily A member 3)

Identity

Alias_namesOR3A6
OR3A7
OR3A8P
olfactory receptor, family 3, subfamily A, member 3
Alias_symbol (synonym)OR17-201
OR17-137
OR17-16
Other alias
HGNC (Hugo) OR3A3
LocusID (NCBI) 8392
Atlas_Id 71301
Location 17p13.2  [Link to chromosome band 17p13]
Location_base_pair Starts at 3420568 and ends at 3421533 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR3A3   8284
Cards
Entrez_Gene (NCBI)OR3A3  8392  olfactory receptor family 3 subfamily A member 3
AliasesOR17-137; OR17-16; OR17-201; OR3A6; 
OR3A7; OR3A8P
GeneCards (Weizmann)OR3A3
Ensembl hg19 (Hinxton)ENSG00000159961 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000159961 [Gene_View]  chr17:3420568-3421533 [Contig_View]  OR3A3 [Vega]
ICGC DataPortalENSG00000159961
TCGA cBioPortalOR3A3
AceView (NCBI)OR3A3
Genatlas (Paris)OR3A3
WikiGenes8392
SOURCE (Princeton)OR3A3
Genetics Home Reference (NIH)OR3A3
Genomic and cartography
GoldenPath hg38 (UCSC)OR3A3  -     chr17:3420568-3421533 +  17p13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR3A3  -     17p13.2   [Description]    (hg19-Feb_2009)
EnsemblOR3A3 - 17p13.2 [CytoView hg19]  OR3A3 - 17p13.2 [CytoView hg38]
Mapping of homologs : NCBIOR3A3 [Mapview hg19]  OR3A3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC069415 BC108921
RefSeq transcript (Entrez)NM_012373
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR3A3
Cluster EST : UnigeneHs.532689 [ NCBI ]
CGAP (NCI)Hs.532689
Alternative Splicing GalleryENSG00000159961
Gene ExpressionOR3A3 [ NCBI-GEO ]   OR3A3 [ EBI - ARRAY_EXPRESS ]   OR3A3 [ SEEK ]   OR3A3 [ MEM ]
Gene Expression Viewer (FireBrowse)OR3A3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)8392
GTEX Portal (Tissue expression)OR3A3
Protein : pattern, domain, 3D structure
UniProt/SwissProtP47888   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP47888  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP47888
Splice isoforms : SwissVarP47888
PhosPhoSitePlusP47888
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR3A3
DMDM Disease mutations8392
Blocks (Seattle)OR3A3
SuperfamilyP47888
Human Protein AtlasENSG00000159961
Peptide AtlasP47888
HPRD11413
IPIIPI00220564   
Protein Interaction databases
DIP (DOE-UCLA)P47888
IntAct (EBI)P47888
FunCoupENSG00000159961
BioGRIDOR3A3
STRING (EMBL)OR3A3
ZODIACOR3A3
Ontologies - Pathways
QuickGOP47888
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  signal transduction  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  signal transduction  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR3A3
Atlas of Cancer Signalling NetworkOR3A3
Wikipedia pathwaysOR3A3
Orthology - Evolution
OrthoDB8392
GeneTree (enSembl)ENSG00000159961
Phylogenetic Trees/Animal Genes : TreeFamOR3A3
HOVERGENP47888
HOGENOMP47888
Homologs : HomoloGeneOR3A3
Homology/Alignments : Family Browser (UCSC)OR3A3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR3A3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR3A3
dbVarOR3A3
ClinVarOR3A3
1000_GenomesOR3A3 
Exome Variant ServerOR3A3
ExAC (Exome Aggregation Consortium)OR3A3 (select the gene name)
Genetic variants : HAPMAP8392
Genomic Variants (DGV)OR3A3 [DGVbeta]
DECIPHEROR3A3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR3A3 
Mutations
ICGC Data PortalOR3A3 
TCGA Data PortalOR3A3 
Broad Tumor PortalOR3A3
OASIS PortalOR3A3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR3A3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR3A3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR3A3
DgiDB (Drug Gene Interaction Database)OR3A3
DoCM (Curated mutations)OR3A3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR3A3 (select a term)
intoGenOR3A3
Cancer3DOR3A3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR3A3
Genetic Testing Registry OR3A3
NextProtP47888 [Medical]
TSGene8392
GENETestsOR3A3
Target ValidationOR3A3
Huge Navigator OR3A3 [HugePedia]
snp3D : Map Gene to Disease8392
BioCentury BCIQOR3A3
ClinGenOR3A3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD8392
Chemical/Pharm GKB GenePA32225
Clinical trialOR3A3
Miscellaneous
canSAR (ICR)OR3A3 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR3A3
EVEXOR3A3
GoPubMedOR3A3
iHOPOR3A3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:33:05 CEST 2017

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