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OR4A15 (olfactory receptor family 4 subfamily A member 15)

Identity

Alias_namesolfactory receptor, family 4, subfamily A, member 15
Other aliasOR11-118
HGNC (Hugo) OR4A15
LocusID (NCBI) 81328
Atlas_Id 71303
Location 11q11  [Link to chromosome band 11q11]
Location_base_pair Starts at 55367884 and ends at 55368918 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR4A15   15152
Cards
Entrez_Gene (NCBI)OR4A15  81328  olfactory receptor family 4 subfamily A member 15
AliasesOR11-118
GeneCards (Weizmann)OR4A15
Ensembl hg19 (Hinxton)ENSG00000181958 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000181958 [Gene_View]  chr11:55367884-55368918 [Contig_View]  OR4A15 [Vega]
ICGC DataPortalENSG00000181958
TCGA cBioPortalOR4A15
AceView (NCBI)OR4A15
Genatlas (Paris)OR4A15
WikiGenes81328
SOURCE (Princeton)OR4A15
Genetics Home Reference (NIH)OR4A15
Genomic and cartography
GoldenPath hg38 (UCSC)OR4A15  -     chr11:55367884-55368918 +  11q11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR4A15  -     11q11   [Description]    (hg19-Feb_2009)
EnsemblOR4A15 - 11q11 [CytoView hg19]  OR4A15 - 11q11 [CytoView hg38]
Mapping of homologs : NCBIOR4A15 [Mapview hg19]  OR4A15 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001005275
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR4A15
Cluster EST : UnigeneHs.554529 [ NCBI ]
CGAP (NCI)Hs.554529
Alternative Splicing GalleryENSG00000181958
Gene ExpressionOR4A15 [ NCBI-GEO ]   OR4A15 [ EBI - ARRAY_EXPRESS ]   OR4A15 [ SEEK ]   OR4A15 [ MEM ]
Gene Expression Viewer (FireBrowse)OR4A15 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)81328
GTEX Portal (Tissue expression)OR4A15
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGL6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGL6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGL6
Splice isoforms : SwissVarQ8NGL6
PhosPhoSitePlusQ8NGL6
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR4A15
DMDM Disease mutations81328
Blocks (Seattle)OR4A15
SuperfamilyQ8NGL6
Human Protein AtlasENSG00000181958
Peptide AtlasQ8NGL6
HPRD14958
IPIIPI00303512   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGL6
IntAct (EBI)Q8NGL6
FunCoupENSG00000181958
BioGRIDOR4A15
STRING (EMBL)OR4A15
ZODIACOR4A15
Ontologies - Pathways
QuickGOQ8NGL6
Ontology : AmiGOtransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBItransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR4A15
Atlas of Cancer Signalling NetworkOR4A15
Wikipedia pathwaysOR4A15
Orthology - Evolution
OrthoDB81328
GeneTree (enSembl)ENSG00000181958
Phylogenetic Trees/Animal Genes : TreeFamOR4A15
HOVERGENQ8NGL6
HOGENOMQ8NGL6
Homologs : HomoloGeneOR4A15
Homology/Alignments : Family Browser (UCSC)OR4A15
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR4A15 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR4A15
dbVarOR4A15
ClinVarOR4A15
1000_GenomesOR4A15 
Exome Variant ServerOR4A15
ExAC (Exome Aggregation Consortium)OR4A15 (select the gene name)
Genetic variants : HAPMAP81328
Genomic Variants (DGV)OR4A15 [DGVbeta]
DECIPHEROR4A15 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR4A15 
Mutations
ICGC Data PortalOR4A15 
TCGA Data PortalOR4A15 
Broad Tumor PortalOR4A15
OASIS PortalOR4A15 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR4A15  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR4A15
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
BioMutasearch OR4A15
DgiDB (Drug Gene Interaction Database)OR4A15
DoCM (Curated mutations)OR4A15 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR4A15 (select a term)
intoGenOR4A15
Cancer3DOR4A15(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR4A15
Genetic Testing Registry OR4A15
NextProtQ8NGL6 [Medical]
TSGene81328
GENETestsOR4A15
Huge Navigator OR4A15 [HugePedia]
snp3D : Map Gene to Disease81328
BioCentury BCIQOR4A15
ClinGenOR4A15
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD81328
Chemical/Pharm GKB GenePA32234
Clinical trialOR4A15
Miscellaneous
canSAR (ICR)OR4A15 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR4A15
EVEXOR4A15
GoPubMedOR4A15
iHOPOR4A15
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 11:46:31 CEST 2017

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