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OR4B1 (olfactory receptor family 4 subfamily B member 1)

Identity

Alias_namesolfactory receptor, family 4, subfamily B, member 1
Alias_symbol (synonym)OST208
Other aliasOR11-106
HGNC (Hugo) OR4B1
LocusID (NCBI) 119765
Atlas_Id 71306
Location 11p11.2  [Link to chromosome band 11p11]
Location_base_pair Starts at 48216810 and ends at 48217739 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR4B1   8290
Cards
Entrez_Gene (NCBI)OR4B1  119765  olfactory receptor family 4 subfamily B member 1
AliasesOR11-106; OST208
GeneCards (Weizmann)OR4B1
Ensembl hg19 (Hinxton)ENSG00000175619 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000175619 [Gene_View]  chr11:48216810-48217739 [Contig_View]  OR4B1 [Vega]
ICGC DataPortalENSG00000175619
TCGA cBioPortalOR4B1
AceView (NCBI)OR4B1
Genatlas (Paris)OR4B1
WikiGenes119765
SOURCE (Princeton)OR4B1
Genetics Home Reference (NIH)OR4B1
Genomic and cartography
GoldenPath hg38 (UCSC)OR4B1  -     chr11:48216810-48217739 +  11p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR4B1  -     11p11.2   [Description]    (hg19-Feb_2009)
EnsemblOR4B1 - 11p11.2 [CytoView hg19]  OR4B1 - 11p11.2 [CytoView hg38]
Mapping of homologs : NCBIOR4B1 [Mapview hg19]  OR4B1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001005470
RefSeq genomic (Entrez)
Conse~sus ko$ing sequences : CCDS (NCBI)OR4B1
Cluster EST : UnigeneHs.553566 [ NCBI ]
CGAP (NCI)Hs.553566
Alternative Splicing GalleryENSG00000175619
Gene ExpressionOR4B1 [ NCBI-GEO ]   OR4B1 [ EBI - ARRAY_EXPRESS ]   OR4B1 [ SEEK ]   OR4B1 [ MEM ]
Gene Expression Viewer (FireBrowse)OR4B1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)119765
GTEX Portal (Tissue expression)OR4B1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGF8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGF8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGF8
Splice isoforms : SwissVarQ8NGF8
PhosPhoSitePlusQ8NGF8
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR4B1
DMDM Disease mutations119765
Blocks (Seattle)OR4B1
SuperfamilyQ8NGF8
Human Protein AtlasENSG00000175619
Peptide AtlasQ8NGF8
HPRD14960
IPIIPI00303394   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGF8
IntAct (EBI)Q8NGF8
FunCoupENSG00000175619
BioGRIDOR4B1
STRING (EMBL)OR4B1
ZODIACOR4B1
Ontologies - Pathways
QuickGOQ8NGF8
Ontology : AmiGOtransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBItransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR4B1
Atlas of Cancer Signalling NetworkOR4B1
Wikipedia pathwaysOR4B1
Orthology - Evolution
OrthoDB119765
GeneTree (enSembl)ENSG00000175619
Phylogenetic Trees/Animal Genes : TreeFamOR4B1
HOVERGENQ8NGF8
HOGENOMQ8NGF8
Homologs : HomoloGeneOR4B1
Homology/Alignments : Family Browser (UCSC)OR4B1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR4B1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR4B1
dbVarOR4B1
ClinVarOR4B1
1000_GenomesOR4B1 
Exome Variant ServerOR4B1
ExAC (Exome Aggregation Consortium)OR4B1 (select the gene name)
Genetic variants : HAPMAP119765
Genomic Variants (DGV)OR4B1 [DGVbeta]
DECIPHEROR4B1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR4B1 
Mutations
ICGC Data PortalOR4B1 
TCGA Data PortalOR4B1 
Broad Tumor PortalOR4B1
OASIS PortalOR4B1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR4B1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR4B1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR4B1
DgiDB (Drug Gene Interaction Database)OR4B1
DoCM (Curated mutations)OR4B1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR4B1 (select a term)
intoGenOR4B1
Cancer3DOR4B1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR4B1
Genetic Testing Registry OR4B1
NextProtQ8NGF8 [Medical]
TSGene119765
GENETestsOR4B1
Target ValidationOR4B1
Huge Navigator OR4B1 [HugePedia]
snp3D : Map Gene to Disease119765
BioCentury BCIQOR4B1
ClinGenOR4B1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD119765
Chemical/Pharm GKB GenePA32250
Clinical trialOR4B1
Miscellaneous
canSAR (ICR)OR4B1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR4B1
EVEXOR4B1
GoPubMedOR4B1
iHOPOR4B1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:33:06 CEST 2017

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