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OR4C45 (olfactory receptor family 4 subfamily C member 45 (gene/pseudogene))

Identity

Alias_namesolfactory receptor, family 4, subfamily C, member 45
Other alias-
HGNC (Hugo) OR4C45
LocusID (NCBI) 403257
Atlas_Id 71314
Location 11p11.12  [Link to chromosome band 11p11]
Location_base_pair Starts at 50032874 and ends at 50033794 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR4C45   31270
Cards
Entrez_Gene (NCBI)OR4C45  403257  olfactory receptor family 4 subfamily C member 45 (gene/pseudogene)
Aliases
GeneCards (Weizmann)OR4C45
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr11:50032874-50033794 [Contig_View]  OR4C45 [Vega]
TCGA cBioPortalOR4C45
AceView (NCBI)OR4C45
Genatlas (Paris)OR4C45
WikiGenes403257
SOURCE (Princeton)OR4C45
Genetics Home Reference (NIH)OR4C45
Genomic and cartography
GoldenPath hg38 (UCSC)OR4C45  -     chr11:50032874-50033794 +  11p11.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR4C45  -     11p11.12   [Description]    (hg19-Feb_2009)
EnsemblOR4C45 - 11p11.12 [CytoView hg19]  OR4C45 - 11p11.12 [CytoView hg38]
Mapping of homologs : NCBIOR4C45 [Mapview hg19]  OR4C45 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC152967 BC156621
RefSeq transcript (Entrez)NM_001005513
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR4C45
Cluster EST : UnigeneHs.554533 [ NCBI ]
CGAP (NCI)Hs.554533
Gene ExpressionOR4C45 [ NCBI-GEO ]   OR4C45 [ EBI - ARRAY_EXPRESS ]   OR4C45 [ SEEK ]   OR4C45 [ MEM ]
Gene Expression Viewer (FireBrowse)OR4C45 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)403257
GTEX Portal (Tissue expression)OR4C45
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NMZ5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NMZ5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NMZ5
Splice isoforms : SwissVarA6NMZ5
PhosPhoSitePlusA6NMZ5
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR4C45
DMDM Disease mutations403257
Blocks (Seattle)OR4C45
SuperfamilyA6NMZ5
Peptide AtlasA6NMZ5
HPRD17723
IPIIPI00253464   
Protein Interaction databases
DIP (DOE-UCLA)A6NMZ5
IntAct (EBI)A6NMZ5
BioGRIDOR4C45
STRING (EMBL)OR4C45
ZODIACOR4C45
Ontologies - Pathways
QuickGOA6NMZ5
Ontology : AmiGOtransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBItransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR4C45
Atlas of Cancer Signalling NetworkOR4C45
Wikipedia pathwaysOR4C45
Orthology - Evolution
OrthoDB403257
Phylogenetic Trees/Animal Genes : TreeFamOR4C45
HOVERGENA6NMZ5
HOGENOMA6NMZ5
Homologs : HomoloGeneOR4C45
Homology/Alignments : Family Browser (UCSC)OR4C45
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR4C45 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR4C45
dbVarOR4C45
ClinVarOR4C45
1000_GenomesOR4C45 
Exome Variant ServerOR4C45
ExAC (Exome Aggregation Consortium)OR4C45 (select the gene name)
Genetic variants : HAPMAP403257
Genomic Variants (DGV)OR4C45 [DGVbeta]
DECIPHEROR4C45 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR4C45 
Mutations
ICGC Data PortalOR4C45 
TCGA Data PortalOR4C45 
Broad Tumor PortalOR4C45
OASIS PortalOR4C45 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDOR4C45
BioMutasearch OR4C45
DgiDB (Drug Gene Interaction Database)OR4C45
DoCM (Curated mutations)OR4C45 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR4C45 (select a term)
intoGenOR4C45
Cancer3DOR4C45(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR4C45
Genetic Testing Registry OR4C45
NextProtA6NMZ5 [Medical]
TSGene403257
GENETestsOR4C45
Target ValidationOR4C45
Huge Navigator OR4C45 [HugePedia]
snp3D : Map Gene to Disease403257
BioCentury BCIQOR4C45
ClinGenOR4C45
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD403257
Chemical/Pharm GKB GenePA134868716
Clinical trialOR4C45
Miscellaneous
canSAR (ICR)OR4C45 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR4C45
EVEXOR4C45
GoPubMedOR4C45
iHOPOR4C45
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:34:18 CEST 2017

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