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OR4D10 (olfactory receptor, family 4, subfamily D, member 10)

Identity

Alias_namesOR4D10P
olfactory receptor, family 4, subfamily D, member 10
Alias_symbol (synonym)OST711
Other aliasOR11-251
HGNC (Hugo) OR4D10
LocusID (NCBI) 390197
Atlas_Id 71317
Location 11q12.1  [Link to chromosome band 11q12]
Location_base_pair Starts at 59244903 and ends at 59245838 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR4D10   15173
Cards
Entrez_Gene (NCBI)OR4D10  390197  olfactory receptor, family 4, subfamily D, member 10
AliasesOR11-251; OR4D10P; OST711
GeneCards (Weizmann)OR4D10
Ensembl hg19 (Hinxton)ENSG00000254466 [Gene_View]  chr11:59244903-59245838 [Contig_View]  OR4D10 [Vega]
Ensembl hg38 (Hinxton)ENSG00000254466 [Gene_View]  chr11:59244903-59245838 [Contig_View]  OR4D10 [Vega]
ICGC DataPortalENSG00000254466
TCGA cBioPortalOR4D10
AceView (NCBI)OR4D10
Genatlas (Paris)OR4D10
WikiGenes390197
SOURCE (Princeton)OR4D10
Genetics Home Reference (NIH)OR4D10
Genomic and cartography
GoldenPath hg19 (UCSC)OR4D10  -     chr11:59244903-59245838 +  11q12.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)OR4D10  -     11q12.1   [Description]    (hg38-Dec_2013)
EnsemblOR4D10 - 11q12.1 [CytoView hg19]  OR4D10 - 11q12.1 [CytoView hg38]
Mapping of homologs : NCBIOR4D10 [Mapview hg19]  OR4D10 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC136893 BC136894
RefSeq transcript (Entrez)NM_001004705
RefSeq genomic (Entrez)NC_000011 NC_018922 NT_167190 NW_004929380
Consensus coding sequences : CCDS (NCBI)OR4D10
Cluster EST : UnigeneHs.553756 [ NCBI ]
CGAP (NCI)Hs.553756
Alternative Splicing GalleryENSG00000254466
Gene ExpressionOR4D10 [ NCBI-GEO ]   OR4D10 [ EBI - ARRAY_EXPRESS ]   OR4D10 [ SEEK ]   OR4D10 [ MEM ]
Gene Expression Viewer (FireBrowse)OR4D10 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)390197
GTEX Portal (Tissue expression)OR4D10
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGI6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGI6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGI6
Splice isoforms : SwissVarQ8NGI6
PhosPhoSitePlusQ8NGI6
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR4D10
DMDM Disease mutations390197
Blocks (Seattle)OR4D10
SuperfamilyQ8NGI6
Human Protein AtlasENSG00000254466
Peptide AtlasQ8NGI6
HPRD14966
IPIIPI00169028   IPI00884272   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGI6
IntAct (EBI)Q8NGI6
FunCoupENSG00000254466
BioGRIDOR4D10
STRING (EMBL)OR4D10
ZODIACOR4D10
Ontologies - Pathways
QuickGOQ8NGI6
Ontology : AmiGOtransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBItransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR4D10
Atlas of Cancer Signalling NetworkOR4D10
Wikipedia pathwaysOR4D10
Orthology - Evolution
OrthoDB390197
GeneTree (enSembl)ENSG00000254466
Phylogenetic Trees/Animal Genes : TreeFamOR4D10
HOVERGENQ8NGI6
HOGENOMQ8NGI6
Homologs : HomoloGeneOR4D10
Homology/Alignments : Family Browser (UCSC)OR4D10
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR4D10 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR4D10
dbVarOR4D10
ClinVarOR4D10
1000_GenomesOR4D10 
Exome Variant ServerOR4D10
ExAC (Exome Aggregation Consortium)OR4D10 (select the gene name)
Genetic variants : HAPMAP390197
Genomic Variants (DGV)OR4D10 [DGVbeta]
DECIPHER (Syndromes)11:59244903-59245838  ENSG00000254466
CONAN: Copy Number AnalysisOR4D10 
Mutations
ICGC Data PortalOR4D10 
TCGA Data PortalOR4D10 
Broad Tumor PortalOR4D10
OASIS PortalOR4D10 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR4D10  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR4D10
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR4D10
DgiDB (Drug Gene Interaction Database)OR4D10
DoCM (Curated mutations)OR4D10 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR4D10 (select a term)
intoGenOR4D10
Cancer3DOR4D10(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR4D10
Genetic Testing Registry OR4D10
NextProtQ8NGI6 [Medical]
TSGene390197
GENETestsOR4D10
Huge Navigator OR4D10 [HugePedia]
snp3D : Map Gene to Disease390197
BioCentury BCIQOR4D10
ClinGenOR4D10
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD390197
Chemical/Pharm GKB GenePA32268
Clinical trialOR4D10
Miscellaneous
canSAR (ICR)OR4D10 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR4D10
EVEXOR4D10
GoPubMedOR4D10
iHOPOR4D10
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:36:34 CET 2017

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