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OR4E1 (olfactory receptor family 4 subfamily E member 1 (gene/pseudogene))

Identity

Alias_namesOR4E1P
olfactory receptor, family 4, subfamily E, member 1 pseudogene
olfactory receptor, family 4, subfamily E, member 1 (gene/pseudogene)
Other alias
HGNC (Hugo) OR4E1
LocusID (NCBI) 26687
Atlas_Id 77940
Location 14q11.2  [Link to chromosome band 14q11]
Location_base_pair Starts at 21669912 and ends at 21671017 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR4E1   8296
Cards
Entrez_Gene (NCBI)OR4E1  26687  olfactory receptor family 4 subfamily E member 1 (gene/pseudogene)
AliasesOR4E1P
GeneCards (Weizmann)OR4E1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr14:21669912-21671017 [Contig_View]  OR4E1 [Vega]
TCGA cBioPortalOR4E1
AceView (NCBI)OR4E1
Genatlas (Paris)OR4E1
WikiGenes26687
SOURCE (Princeton)OR4E1
Genetics Home Reference (NIH)OR4E1
Genomic and cartography
GoldenPath hg38 (UCSC)OR4E1  -     chr14:21669912-21671017 -  14q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR4E1  -     14q11.2   [Description]    (hg19-Feb_2009)
EnsemblOR4E1 - 14q11.2 [CytoView hg19]  OR4E1 - 14q11.2 [CytoView hg38]
Mapping of homologs : NCBIOR4E1 [Mapview hg19]  OR4E1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001317107
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR4E1
Gene ExpressionOR4E1 [ NCBI-GEO ]   OR4E1 [ EBI - ARRAY_EXPRESS ]   OR4E1 [ SEEK ]   OR4E1 [ MEM ]
Gene Expression Viewer (FireBrowse)OR4E1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)26687
GTEX Portal (Tissue expression)OR4E1
Protein : pattern, domain, 3D structure
UniProt/SwissProtP0C645   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP0C645  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP0C645
Splice isoforms : SwissVarP0C645
PhosPhoSitePlusP0C645
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Domain families : Smart (EMBL)7TM_GPCR_Srsx (SM01381)  
Conserved Domain (NCBI)OR4E1
DMDM Disease mutations26687
Blocks (Seattle)OR4E1
SuperfamilyP0C645
Peptide AtlasP0C645
IPIIPI00786842   
Protein Interaction databases
DIP (DOE-UCLA)P0C645
IntAct (EBI)P0C645
BioGRIDOR4E1
STRING (EMBL)OR4E1
ZODIACOR4E1
Ontologies - Pathways
QuickGOP0C645
Ontology : AmiGOtransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBItransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
NDEx NetworkOR4E1
Atlas of Cancer Signalling NetworkOR4E1
Wikipedia pathwaysOR4E1
Orthology - Evolution
OrthoDB26687
Phylogenetic Trees/Animal Genes : TreeFamOR4E1
HOVERGENP0C645
HOGENOMP0C645
Homologs : HomoloGeneOR4E1
Homology/Alignments : Family Browser (UCSC)OR4E1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR4E1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR4E1
dbVarOR4E1
ClinVarOR4E1
1000_GenomesOR4E1 
Exome Variant ServerOR4E1
ExAC (Exome Aggregation Consortium)OR4E1 (select the gene name)
Genetic variants : HAPMAP26687
Genomic Variants (DGV)OR4E1 [DGVbeta]
DECIPHEROR4E1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR4E1 
Mutations
ICGC Data PortalOR4E1 
TCGA Data PortalOR4E1 
Broad Tumor PortalOR4E1
OASIS PortalOR4E1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDOR4E1
BioMutasearch OR4E1
DgiDB (Drug Gene Interaction Database)OR4E1
DoCM (Curated mutations)OR4E1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR4E1 (select a term)
intoGenOR4E1
Cancer3DOR4E1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR4E1
Genetic Testing Registry OR4E1
NextProtP0C645 [Medical]
TSGene26687
GENETestsOR4E1
Target ValidationOR4E1
Huge Navigator OR4E1 [HugePedia]
snp3D : Map Gene to Disease26687
BioCentury BCIQOR4E1
ClinGenOR4E1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26687
Chemical/Pharm GKB GenePA32277
Clinical trialOR4E1
Miscellaneous
canSAR (ICR)OR4E1 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR4E1
EVEXOR4E1
GoPubMedOR4E1
iHOPOR4E1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:33:08 CEST 2017

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