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OR4E2 (olfactory receptor family 4 subfamily E member 2)

Identity

Alias_namesolfactory receptor, family 4, subfamily E, member 2
Other aliasOR14-42
HGNC (Hugo) OR4E2
LocusID (NCBI) 26686
Atlas_Id 71323
Location 14q11.2  [Link to chromosome band 14q11]
Location_base_pair Starts at 21665083 and ends at 21666024 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR4E2   8297
Cards
Entrez_Gene (NCBI)OR4E2  26686  olfactory receptor family 4 subfamily E member 2
AliasesOR14-42
GeneCards (Weizmann)OR4E2
Ensembl hg19 (Hinxton)ENSG00000221977 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000221977 [Gene_View]  chr14:21665083-21666024 [Contig_View]  OR4E2 [Vega]
ICGC DataPortalENSG00000221977
TCGA cBioPortalOR4E2
AceView (NCBI)OR4E2
Genatlas (Paris)OR4E2
WikiGenes26686
SOURCE (Princeton)OR4E2
Genetics Home Reference (NIH)OR4E2
Genomic and cartography
GoldenPath hg38 (UCSC)OR4E2  -     chr14:21665083-21666024 +  14q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR4E2  -     14q11.2   [Description]    (hg19-Feb_2009)
EnsemblOR4E2 - 14q11.2 [CytoView hg19]  OR4E2 - 14q11.2 [CytoView hg38]
Mapping of homologs : NCBIOR4E2 [Mapview hg19]  OR4E2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AY726598 BC146414 BC148853
RefSeq transcript (Entrez)NM_001001912
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR4E2
Cluster EST : UnigeneHs.547982 [ NCBI ]
CGAP (NCI)Hs.547982
Alternative Splicing GalleryENSG00000221977
Gene ExpressionOR4E2 [ NCBI-GEO ]   OR4E2 [ EBI - ARRAY_EXPRESS ]   OR4E2 [ SEEK ]   OR4E2 [ MEM ]
Gene Expression Viewer (FireBrowse)OR4E2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)26686
GTEX Portal (Tissue expression)OR4E2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGC2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGC2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGC2
Splice isoforms : SwissVarQ8NGC2
PhosPhoSitePlusQ8NGC2
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Domain families : Smart (EMBL)7TM_GPCR_Srsx (SM01381)  
Conserved Domain (NCBI)OR4E2
DMDM Disease mutations26686
Blocks (Seattle)OR4E2
SuperfamilyQ8NGC2
Human Protein AtlasENSG00000221977
Peptide AtlasQ8NGC2
HPRD11414
IPIIPI00168974   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGC2
IntAct (EBI)Q8NGC2
FunCoupENSG00000221977
BioGRIDOR4E2
STRING (EMBL)OR4E2
ZODIACOR4E2
Ontologies - Pathways
QuickGOQ8NGC2
Ontology : AmiGOtransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBItransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR4E2
Atlas of Cancer Signalling NetworkOR4E2
Wikipedia pathwaysOR4E2
Orthology - Evolution
OrthoDB26686
GeneTree (enSembl)ENSG00000221977
Phylogenetic Trees/Animal Genes : TreeFamOR4E2
HOVERGENQ8NGC2
HOGENOMQ8NGC2
Homologs : HomoloGeneOR4E2
Homology/Alignments : Family Browser (UCSC)OR4E2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR4E2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR4E2
dbVarOR4E2
ClinVarOR4E2
1000_GenomesOR4E2 
Exome Variant ServerOR4E2
ExAC (Exome Aggregation Consortium)OR4E2 (select the gene name)
Genetic variants : HAPMAP26686
Genomic Variants (DGV)OR4E2 [DGVbeta]
DECIPHEROR4E2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR4E2 
Mutations
ICGC Data Portal<@ HRF=lttp://dcc.icgc.org/q?q=OR4E2&type=mutation TARGET=ICGC>OR4E2 
TCGA Data PortalOR4E2 
Broad Tumor PortalOR4E2
OASIS PortalOR4E2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR4E2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR4E2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR4E2
DgiDB (Drug Gene Interaction Database)OR4E2
DoCM (Curated mutations)OR4E2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR4E2 (select a term)
intoGenOR4E2
Cancer3DOR4E2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR4E2
Genetic Testing Registry OR4E2
NextProtQ8NGC2 [Medical]
TSGene26686
GENETestsOR4E2
Target ValidationOR4E2
Huge Navigator OR4E2 [HugePedia]
snp3D : Map Gene to Disease26686
BioCentury BCIQOR4E2
ClinGenOR4E2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26686
Chemical/Pharm GKB GenePA32278
Clinical trialOR4E2
Miscellaneous
canSAR (ICR)OR4E2 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR4E2
EVEXOR4E2
GoPubMedOR4E2
iHOPOR4E2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:33:09 CEST 2017

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