Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

OR4F15 (olfactory receptor, family 4, subfamily F, member 15)

Identity

Alias_namesolfactory receptor, family 4, subfamily F, member 15
Other alias-
HGNC (Hugo) OR4F15
LocusID (NCBI) 390649
Atlas_Id 71325
Location 15q26.3  [Link to chromosome band 15q26]
Location_base_pair Starts at 102358390 and ends at 102359328 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR4F15   15078
Cards
Entrez_Gene (NCBI)OR4F15  390649  olfactory receptor, family 4, subfamily F, member 15
Aliases
GeneCards (Weizmann)OR4F15
Ensembl hg19 (Hinxton)ENSG00000182854 [Gene_View]  chr15:102358390-102359328 [Contig_View]  OR4F15 [Vega]
Ensembl hg38 (Hinxton)ENSG00000182854 [Gene_View]  chr15:102358390-102359328 [Contig_View]  OR4F15 [Vega]
ICGC DataPortalENSG00000182854
TCGA cBioPortalOR4F15
AceView (NCBI)OR4F15
Genatlas (Paris)OR4F15
WikiGenes390649
SOURCE (Princeton)OR4F15
Genetics Home Reference (NIH)OR4F15
Genomic and cartography
GoldenPath hg19 (UCSC)OR4F15  -     chr15:102358390-102359328 +  15q26.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)OR4F15  -     15q26.3   [Description]    (hg38-Dec_2013)
EnsemblOR4F15 - 15q26.3 [CytoView hg19]  OR4F15 - 15q26.3 [CytoView hg38]
Mapping of homologs : NCBIOR4F15 [Mapview hg19]  OR4F15 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC137064 BC137065
RefSeq transcript (Entrez)NM_001001674
RefSeq genomic (Entrez)NC_000015 NC_018926 NT_010194 NW_004929399
Consensus coding sequences : CCDS (NCBI)OR4F15
Cluster EST : UnigeneHs.554589 [ NCBI ]
CGAP (NCI)Hs.554589
Alternative Splicing GalleryENSG00000182854
Gene ExpressionOR4F15 [ NCBI-GEO ]   OR4F15 [ EBI - ARRAY_EXPRESS ]   OR4F15 [ SEEK ]   OR4F15 [ MEM ]
Gene Expression Viewer (FireBrowse)OR4F15 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)390649
GTEX Portal (Tissue expression)OR4F15
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGB8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGB8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGB8
Splice isoforms : SwissVarQ8NGB8
PhosPhoSitePlusQ8NGB8
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR4F15
DMDM Disease mutations390649
Blocks (Seattle)OR4F15
SuperfamilyQ8NGB8
Human Protein AtlasENSG00000182854
Peptide AtlasQ8NGB8
HPRD14968
IPIIPI00168971   IPI00428667   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGB8
IntAct (EBI)Q8NGB8
FunCoupENSG00000182854
BioGRIDOR4F15
STRING (EMBL)OR4F15
ZODIACOR4F15
Ontologies - Pathways
QuickGOQ8NGB8
Ontology : AmiGOtransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBItransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR4F15
Atlas of Cancer Signalling NetworkOR4F15
Wikipedia pathwaysOR4F15
Orthology - Evolution
OrthoDB390649
GeneTree (enSembl)ENSG00000182854
Phylogenetic Trees/Animal Genes : TreeFamOR4F15
HOVERGENQ8NGB8
HOGENOMQ8NGB8
Homologs : HomoloGeneOR4F15
Homology/Alignments : Family Browser (UCSC)OR4F15
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR4F15 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR4F15
dbVarOR4F15
ClinVarOR4F15
1000_GenomesOR4F15 
Exome Variant ServerOR4F15
ExAC (Exome Aggregation Consortium)OR4F15 (select the gene name)
Genetic variants : HAPMAP390649
Genomic Variants (DGV)OR4F15 [DGVbeta]
DECIPHER (Syndromes)15:102358390-102359328  ENSG00000182854
CONAN: Copy Number AnalysisOR4F15 
Mutations
ICGC Data PortalOR4F15 
TCGA Data PortalOR4F15 
Broad Tumor PortalOR4F15
OASIS PortalOR4F15 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR4F15  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR4F15
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR4F15
DgiDB (Drug Gene Interaction Database)OR4F15
DoCM (Curated mutations)OR4F15 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR4F15 (select a term)
intoGenOR4F15
Cancer3DOR4F15(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR4F15
Genetic Testing Registry OR4F15
NextProtQ8NGB8 [Medical]
TSGene390649
GENETestsOR4F15
Huge Navigator OR4F15 [HugePedia]
snp3D : Map Gene to Disease390649
BioCentury BCIQOR4F15
ClinGenOR4F15
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD390649
Chemical/Pharm GKB GenePA32283
Clinical trialOR4F15
Miscellaneous
canSAR (ICR)OR4F15 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR4F15
EVEXOR4F15
GoPubMedOR4F15
iHOPOR4F15
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:36:36 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.