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OR4F4 (olfactory receptor family 4 subfamily F member 4)

Identity

Alias_namesolfactory receptor, family 4, subfamily F, member 4
Alias_symbol (synonym)OR4F18
Other aliasOLA-7501
HGNC (Hugo) OR4F4
LocusID (NCBI) 26682
Atlas_Id 71331
Location 15q26.3  [Link to chromosome band 15q26]
Location_base_pair Starts at 101922142 and ends at 101923059 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR4F4   8301
Cards
Entrez_Gene (NCBI)OR4F4  26682  olfactory receptor family 4 subfamily F member 4
AliasesOLA-7501; OR4F18
GeneCards (Weizmann)OR4F4
Ensembl hg19 (Hinxton)ENSG00000177693 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000177693 [Gene_View]  chr15:101922142-101923059 [Contig_View]  OR4F4 [Vega]
ICGC DataPortalENSG00000177693
TCGA cBioPortalOR4F4
AceView (NCBI)OR4F4
Genatlas (Paris)OR4F4
WikiGenes26682
SOURCE (Princeton)OR4F4
Genetics Home Reference (NIH)OR4F4
Genomic and cartography
GoldenPath hg38 (UCSC)OR4F4  -     chr15:101922142-101923059 -  15q26.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR4F4  -     15q26.3   [Description]    (hg19-Feb_2009)
EnsemblOR4F4 - 15q26.3 [CytoView hg19]  OR4F4 - 15q26.3 [CytoView hg38]
Mapping of homologs : NCBIOR4F4 [Mapview hg19]  OR4F4 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AY972819 BC136907 BC136908
RefSeq transcript (Entrez)NM_001004195
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR4F4
Cluster EST : UnigeneHs.554420 [ NCBI ]
CGAP (NCI)Hs.554420
Alternative Splicing GalleryENSG00000177693
Gene ExpressionOR4F4 [ NCBI-GEO ]   OR4F4 [ EBI - ARRAY_EXPRESS ]   OR4F4 [ SEEK ]   OR4F4 [ MEM ]
Gene Expression Viewer (FireBrowse)OR4F4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)26682
GTEX Portal (Tissue expression)OR4F4
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96R69   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96R69  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96R69
Splice isoforms : SwissVarQ96R69
PhosPhoSitePlusQ96R69
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR4F4
DMDM Disease mutations26682
Blocks (Seattle)OR4F4
SuperfamilyQ96R69
Human Protein AtlasENSG00000177693
Peptide AtlasQ96R69
HPRD14973
IPIIPI00382798   
Protein Interaction databases
DIP (DOE-UCLA)Q96R69
IntAct (EBI)Q96R69
FunCoupENSG00000177693
BioGRIDOR4F4
STRING (EMBL)OR4F4
ZODIACOR4F4
Ontologies - Pathways
QuickGOQ96R69
Ontology : AmiGOtransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBItransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR4F4
Atlas of Cancer Signalling NetworkOR4F4
Wikipedia pathwaysOR4F4
Orthology - Evolution
OrthoDB26682
GeneTree (enSembl)ENSG00000177693
Phylogenetic Trees/Animal Genes : TreeFamOR4F4
HOVERGENQ96R69
HOGENOMQ96R69
Homologs : HomoloGeneOR4F4
Homology/Alignments : Family Browser (UCSC)OR4F4
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR4F4 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR4F4
dbVarOR4F4
ClinVarOR4F4
1000_GenomesOR4F4 
Exome Variant ServerOR4F4
ExAC (Exome Aggregation Consortium)OR4F4 (select the gene name)
Genetic variants : HAPMAP26682
Genomic Variants (DGV)OR4F4 [DGVbeta]
DECIPHEROR4F4 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR4F4 
Mutations
ICGC Data PortalOR4F4 
TCGA Data PortalOR4F4 
Broad Tumor PortalOR4F4
OASIS PortalOR4F4 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR4F4  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR4F4
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR4F4
DgiDB (Drug Gene Interaction Database)OR4F4
DoCM (Curated mutations)OR4F4 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR4F4 (select a term)
intoGenOR4F4
Cancer3DOR4F4(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR4F4
Genetic Testing Registry OR4F4
NextProtQ96R69 [Medical]
TSGene26682
GENETestsOR4F4
Target ValidationOR4F4
Huge Navigator OR4F4 [HugePedia]
snp3D : Map Gene to Disease26682
BioCentury BCIQOR4F4
ClinGenOR4F4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26682
Chemical/Pharm GKB GenePA32290
Clinical trialOR4F4
Miscellaneous
canSAR (ICR)OR4F4 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR4F4
EVEXOR4F4
GoPubMedOR4F4
iHOPOR4F4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:33:10 CEST 2017

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