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OR4K13 (olfactory receptor family 4 subfamily K member 13)

Identity

Alias_namesolfactory receptor, family 4, subfamily K, member 13
Other aliasOR14-27
HGNC (Hugo) OR4K13
LocusID (NCBI) 390433
Atlas_Id 71335
Location 14q11.2  [Link to chromosome band 14q11]
Location_base_pair Starts at 20033844 and ends at 20034758 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR4K13   15351
Cards
Entrez_Gene (NCBI)OR4K13  390433  olfactory receptor family 4 subfamily K member 13
AliasesOR14-27
GeneCards (Weizmann)OR4K13
Ensembl hg19 (Hinxton)ENSG00000176253 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000176253 [Gene_View]  chr14:20033844-20034758 [Contig_View]  OR4K13 [Vega]
ICGC DataPortalENSG00000176253
TCGA cBioPortalOR4K13
AceView (NCBI)OR4K13
Genatlas (Paris)OR4K13
WikiGenes390433
SOURCE (Princeton)OR4K13
Genetics Home Reference (NIH)OR4K13
Genomic and cartography
GoldenPath hg38 (UCSC)OR4K13  -     chr14:20033844-20034758 -  14q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR4K13  -     14q11.2   [Description]    (hg19-Feb_2009)
EnsemblOR4K13 - 14q11.2 [CytoView hg19]  OR4K13 - 14q11.2 [CytoView hg38]
Mapping of homologs : NCBIOR4K13 [Mapview hg19]  OR4K13 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001004714
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR4K13
Cluster EST : UnigeneHs.553573 [ NCBI ]
CGAP (NCI)Hs.553573
Alternative Splicing GalleryENSG00000176253
Gene ExpressionOR4K13 [ NCBI-GEO ]   OR4K13 [ EBI - ARRAY_EXPRESS ]   OR4K13 [ SEEK ]   OR4K13 [ MEM ]
Gene Expression Viewer (FireBrowse)OR4K13 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)390433
GTEX Portal (Tissue expression)OR4K13
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NH42   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NH42  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NH42
Splice isoforms : SwissVarQ8NH42
PhosPhoSitePlusQ8NH42
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR4K13
DMDM Disease mutations390433
Blocks (Seattle)OR4K13
SuperfamilyQ8NH42
Human Protein AtlasENSG00000176253
Peptide AtlasQ8NH42
HPRD14976
IPIIPI00303654   
Protein Interaction databases
DIP (DOE-UCLA)Q8NH42
IntAct (EBI)Q8NH42
FunCoupENSG00000176253
BioGRIDOR4K13
STRING (EMBL)OR4K13
ZODIACOR4K13
Ontologies - Pathways
QuickGOQ8NH42
Ontology : AmiGOtransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBItransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR4K13
Atlas of Cancer Signalling NetworkOR4K13
Wikipedia pathwaysOR4K13
Orthology - Evolution
OrthoDB390433
GeneTree (enSembl)ENSG00000176253
Phylogenetic Trees/Animal Genes : TreeFamOR4K13
HOVERGENQ8NH42
HOGENOMQ8NH42
Homologs : HomoloGeneOR4K13
Homology/Alignments : Family Browser (UCSC)OR4K13
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR4K13 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR4K13
dbVarOR4K13
ClinVarOR4K13
1000_GenomesOR4K13 
Exome Variant ServerOR4K13
ExAC (Exome Aggregation Consortium)OR4K13 (select the gene name)
Genetic variants : HAPMAP390433
Genomic Variants (DGV)OR4K13 [DGVbeta]
DECIPHEROR4K13 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR4K13 
Mutations
ICGC Data PortalOR4K13 
TCGA Data PortalOR4K13 
Broad Tumor PortalOR4K13
OASIS PortalOR4K13 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR4K13  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR4K13
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR4K13
DgiDB (Drug Gene Interaction Database)OR4K13
DoCM (Curated mutations)OR4K13 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR4K13 (select a term)
intoGenOR4K13
Cancer3DOR4K13(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR4K13
Genetic Testing Registry OR4K13
NextProtQ8NH42 [Medical]
TSGene390433
GENETestsOR4K13
Target ValidationOR4K13
Huge Navigator OR4K13 [HugePedia]
snp3D : Map Gene to Disease390433
BioCentury BCIQOR4K13
ClinGenOR4K13
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD390433
Chemical/Pharm GKB GenePA32312
Clinical trialOR4K13
Miscellaneous
canSAR (ICR)OR4K13 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR4K13
EVEXOR4K13
GoPubMedOR4K13
iHOPOR4K13
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:34:22 CEST 2017

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