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OR4K3 (olfactory receptor family 4 subfamily K member 3 (gene/pseudogene))

Identity

Alias_namesOR4K3P
olfactory receptor, family 4, subfamily K, member 3 pseudogene
olfactory receptor, family 4, subfamily K, member 3 (gene/pseudogene)
Other aliasOR14-10
HGNC (Hugo) OR4K3
LocusID (NCBI) 283617
Atlas_Id 79361
Location 14q11.2  [Link to chromosome band 14q11]
Location_base_pair Starts at 19867897 and ends at 19869443 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR4K3   14731
Cards
Entrez_Gene (NCBI)OR4K3  283617  olfactory receptor family 4 subfamily K member 3 (gene/pseudogene)
AliasesOR14-10; OR4K3P
GeneCards (Weizmann)OR4K3
Ensembl hg19 (Hinxton)ENSG00000176290 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000176290 [Gene_View]  chr14:19867897-19869443 [Contig_View]  OR4K3 [Vega]
ICGC DataPortalENSG00000176290
TCGA cBioPortalOR4K3
AceView (NCBI)OR4K3
Genatlas (Paris)OR4K3
WikiGenes283617
SOURCE (Princeton)OR4K3
Genetics Home Reference (NIH)OR4K3
Genomic and cartography
GoldenPath hg38 (UCSC)OR4K3  -     chr14:19867897-19869443 -  14q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR4K3  -     14q11.2   [Description]    (hg19-Feb_2009)
EnsemblOR4K3 - 14q11.2 [CytoView hg19]  OR4K3 - 14q11.2 [CytoView hg38]
Mapping of homologs : NCBIOR4K3 [Mapview hg19]  OR4K3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001348266
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR4K3
Alternative Splicing GalleryENSG00000176290
Gene ExpressionOR4K3 [ NCBI-GEO ]   OR4K3 [ EBI - ARRAY_EXPRESS ]   OR4K3 [ SEEK ]   OR4K3 [ MEM ]
Gene Expression Viewer (FireBrowse)OR4K3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)283617
GTEX Portal (Tissue expression)OR4K3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96R72   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96R72  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96R72
Splice isoforms : SwissVarQ96R72
PhosPhoSitePlusQ96R72
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR4K3
DMDM Disease mutations283617
Blocks (Seattle)OR4K3
SuperfamilyQ96R72
Human Protein AtlasENSG00000176290
Peptide AtlasQ96R72
IPIIPI00646035   
Protein Interaction databases
DIP (DOE-UCLA)Q96R72
IntAct (EBI)Q96R72
FunCoupENSG00000176290
BioGRIDOR4K3
STRING (EMBL)OR4K3
ZODIACOR4K3
Ontologies - Pathways
QuickGOQ96R72
Ontology : AmiGOtransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBItransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
NDEx NetworkOR4K3
Atlas of Cancer Signalling NetworkOR4K3
Wikipedia pathwaysOR4K3
Orthology - Evolution
OrthoDB283617
GeneTree (enSembl)ENSG00000176290
Phylogenetic Trees/Animal Genes : TreeFamOR4K3
HOVERGENQ96R72
HOGENOMQ96R72
Homologs : HomoloGeneOR4K3
Homology/Alignments : Family Browser (UCSC)OR4K3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR4K3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR4K3
dbVarOR4K3
ClinVarOR4K3
1000_GenomesOR4K3 
Exome Variant ServerOR4K3
ExAC (Exome Aggregation Consortium)OR4K3 (select the gene name)
Genetic variants : HAPMAP283617
Genomic Variants (DGV)OR4K3 [DGVbeta]
DECIPHEROR4K3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR4K3 
Mutations
ICGC Data PortalOR4K3 
TCGA Data PortalOR4K3 
Broad Tumor PortalOR4K3
OASIS PortalOR4K3 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDOR4K3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR4K3
DgiDB (Drug Gene Interaction Database)OR4K3
DoCM (Curated mutations)OR4K3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR4K3 (select a term)
intoGenOR4K3
Cancer3DOR4K3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR4K3
Genetic Testing Registry OR4K3
NextProtQ96R72 [Medical]
TSGene283617
GENETestsOR4K3
Target ValidationOR4K3
Huge Navigator OR4K3 [HugePedia]
snp3D : Map Gene to Disease283617
BioCentury BCIQOR4K3
ClinGenOR4K3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD283617
Chemical/Pharm GKB GenePA32318
Clinical trialOR4K3
Miscellaneous
canSAR (ICR)OR4K3 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR4K3
EVEXOR4K3
GoPubMedOR4K3
iHOPOR4K3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:33:11 CEST 2017

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