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OR4K5 (olfactory receptor, family 4, subfamily K, member 5)

Identity

Alias_namesolfactory receptor, family 4, subfamily K, member 5
Other aliasOR14-16
HGNC (Hugo) OR4K5
LocusID (NCBI) 79317
Atlas_Id 71340
Location 14q11.2  [Link to chromosome band 14q11]
Location_base_pair Starts at 20388766 and ends at 20389737 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR4K5   14745
Cards
Entrez_Gene (NCBI)OR4K5  79317  olfactory receptor, family 4, subfamily K, member 5
AliasesOR14-16
GeneCards (Weizmann)OR4K5
Ensembl hg19 (Hinxton)ENSG00000176281 [Gene_View]  chr14:20388766-20389737 [Contig_View]  OR4K5 [Vega]
Ensembl hg38 (Hinxton)ENSG00000176281 [Gene_View]  chr14:20388766-20389737 [Contig_View]  OR4K5 [Vega]
ICGC DataPortalENSG00000176281
TCGA cBioPortalOR4K5
AceView (NCBI)OR4K5
Genatlas (Paris)OR4K5
WikiGenes79317
SOURCE (Princeton)OR4K5
Genetics Home Reference (NIH)OR4K5
Genomic and cartography
GoldenPath hg19 (UCSC)OR4K5  -     chr14:20388766-20389737 +  14q11.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)OR4K5  -     14q11.2   [Description]    (hg38-Dec_2013)
EnsemblOR4K5 - 14q11.2 [CytoView hg19]  OR4K5 - 14q11.2 [CytoView hg38]
Mapping of homologs : NCBIOR4K5 [Mapview hg19]  OR4K5 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC140947
RefSeq transcript (Entrez)NM_001005483
RefSeq genomic (Entrez)NC_000014 NC_018925 NT_026437 NW_004929393
Consensus coding sequences : CCDS (NCBI)OR4K5
Cluster EST : UnigeneHs.554585 [ NCBI ]
CGAP (NCI)Hs.554585
Alternative Splicing GalleryENSG00000176281
Gene ExpressionOR4K5 [ NCBI-GEO ]   OR4K5 [ EBI - ARRAY_EXPRESS ]   OR4K5 [ SEEK ]   OR4K5 [ MEM ]
Gene Expression Viewer (FireBrowse)OR4K5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79317
GTEX Portal (Tissue expression)OR4K5
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGD3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGD3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGD3
Splice isoforms : SwissVarQ8NGD3
PhosPhoSitePlusQ8NGD3
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR4K5
DMDM Disease mutations79317
Blocks (Seattle)OR4K5
SuperfamilyQ8NGD3
Human Protein AtlasENSG00000176281
Peptide AtlasQ8NGD3
HPRD14981
IPIIPI00303364   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGD3
IntAct (EBI)Q8NGD3
FunCoupENSG00000176281
BioGRIDOR4K5
STRING (EMBL)OR4K5
ZODIACOR4K5
Ontologies - Pathways
QuickGOQ8NGD3
Ontology : AmiGOtransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBItransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR4K5
Atlas of Cancer Signalling NetworkOR4K5
Wikipedia pathwaysOR4K5
Orthology - Evolution
OrthoDB79317
GeneTree (enSembl)ENSG00000176281
Phylogenetic Trees/Animal Genes : TreeFamOR4K5
HOVERGENQ8NGD3
HOGENOMQ8NGD3
Homologs : HomoloGeneOR4K5
Homology/Alignments : Family Browser (UCSC)OR4K5
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR4K5 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR4K5
dbVarOR4K5
ClinVarOR4K5
1000_GenomesOR4K5 
Exome Variant ServerOR4K5
ExAC (Exome Aggregation Consortium)OR4K5 (select the gene name)
Genetic variants : HAPMAP79317
Genomic Variants (DGV)OR4K5 [DGVbeta]
DECIPHER (Syndromes)14:20388766-20389737  ENSG00000176281
CONAN: Copy Number AnalysisOR4K5 
Mutations
ICGC Data PortalOR4K5 
TCGA Data PortalOR4K5 
Broad Tumor PortalOR4K5
OASIS PortalOR4K5 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR4K5  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR4K5
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR4K5
DgiDB (Drug Gene Interaction Database)OR4K5
DoCM (Curated mutations)OR4K5 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR4K5 (select a term)
intoGenOR4K5
Cancer3DOR4K5(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR4K5
Genetic Testing Registry OR4K5
NextProtQ8NGD3 [Medical]
TSGene79317
GENETestsOR4K5
Huge Navigator OR4K5 [HugePedia]
snp3D : Map Gene to Disease79317
BioCentury BCIQOR4K5
ClinGenOR4K5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79317
Chemical/Pharm GKB GenePA32320
Clinical trialOR4K5
Miscellaneous
canSAR (ICR)OR4K5 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR4K5
EVEXOR4K5
GoPubMedOR4K5
iHOPOR4K5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:36:39 CET 2017

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