Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

OR4M1 (olfactory receptor family 4 subfamily M member 1)

Identity

Alias_namesolfactory receptor, family 4, subfamily M, member 1
Other aliasOR14-7
HGNC (Hugo) OR4M1
LocusID (NCBI) 441670
Atlas_Id 71342
Location 14q11.2  [Link to chromosome band 14q11]
Location_base_pair Starts at 19780323 and ends at 19781264 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR4M1   14735
Cards
Entrez_Gene (NCBI)OR4M1  441670  olfactory receptor family 4 subfamily M member 1
AliasesOR14-7
GeneCards (Weizmann)OR4M1
Ensembl hg19 (Hinxton)ENSG00000176299 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000176299 [Gene_View]  chr14:19780323-19781264 [Contig_View]  OR4M1 [Vega]
ICGC DataPortalENSG00000176299
TCGA cBioPortalOR4M1
AceView (NCBI)OR4M1
Genatlas (Paris)OR4M1
WikiGenes441670
SOURCE (Princeton)OR4M1
Genetics Home Reference (NIH)OR4M1
Genomic and cartography
GoldenPath hg38 (UCSC)OR4M1  -     chr14:19780323-19781264 +  14q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR4M1  -     14q11.2   [Description]    (hg19-Feb_2009)
EnsemblOR4M1 - 14q11.2 [CytoView hg19]  OR4M1 - 14q11.2 [CytoView hg38]
Mapping of homologs : NCBIOR4M1 [Mapview hg19]  OR4M1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC136987
RefSeq transcript (Entrez)NM_001005500
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR4M1
Cluster EST : UnigeneHs.553829 [ NCBI ]
CGAP (NCI)Hs.553829
Alternative Splicing GalleryENSG00000176299
Gene ExpressionOR4M1 [ NCBI-GEO ]   OR4M1 [ EBI - ARRAY_EXPRESS ]   OR4M1 [ SEEK ]   OR4M1 [ MEM ]
Gene Expression Viewer (FireBrowse)OR4M1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)441670
GTEX Portal (Tissue expression)OR4M1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGD0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGD0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGD0
Splice isoforms : SwissVarQ8NGD0
PhosPhoSitePlusQ8NGD0
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR4M1
DMDM Disease mutations441670
Blocks (Seattle)OR4M1
SuperfamilyQ8NGD0
Human Protein AtlasENSG00000176299
Peptide AtlasQ8NGD0
HPRD14983
IPIIPI00168982   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGD0
IntAct (EBI)Q8NGD0
FunCoupENSG00000176299
BioGRIDOR4M1
STRING (EMBL)OR4M1
ZODIACOR4M1
Ontologies - Pathways
QuickGOQ8NGD0
Ontology : AmiGOtransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBItransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR4M1
Atlas of Cancer Signalling NetworkOR4M1
Wikipedia pathwaysOR4M1
Orthology - Evolution
OrthoDB441670
GeneTree (enSembl)ENSG00000176299
Phylogenetic Trees/Animal Genes : TreeFamOR4M1
HOVERGENQ8NGD0
HOGENOMQ8NGD0
Homologs : HomoloGeneOR4M1
Homology/Alignments : Family Browser (UCSC)OR4M1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR4M1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR4M1
dbVarOR4M1
ClinVarOR4M1
1000_GenomesOR4M1 
Exome Variant ServerOR4M1
ExAC (Exome Aggregation Consortium)OR4M1 (select the gene name)
Genetic variants : HAPMAP441670
Genomic Variants (DGV)OR4M1 [DGVbeta]
DECIPHEROR4M1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR4M1 
Mutations
ICGC Data PortalOR4M1 
TCGA Data PortalOR4M1 
Broad Tumor PortalOR4M1
OASIS PortalOR4M1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR4M1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR4M1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR4M1
DgiDB (Drug Gene Interaction Database)OR4M1
DoCM (Curated mutations)OR4M1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR4M1 (select a term)
intoGenOR4M1
Cancer3DOR4M1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR4M1
Genetic Testing Registry OR4M1
NextProtQ8NGD0 [Medical]
TSGene441670
GENETestsOR4M1
Target ValidationOR4M1
Huge Navigator OR4M1 [HugePedia]
snp3D : Map Gene to Disease441670
BioCentury BCIQOR4M1
ClinGenOR4M1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD441670
Chemical/Pharm GKB GenePA32327
Clinical trialOR4M1
Miscellaneous
canSAR (ICR)OR4M1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR4M1
EVEXOR4M1
GoPubMedOR4M1
iHOPOR4M1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:34:24 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.