Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

OR4N4 (olfactory receptor family 4 subfamily N member 4)

Identity

Alias_namesolfactory receptor, family 4, subfamily N, member 4
Other aliasOR15-1
OR15-5
HGNC (Hugo) OR4N4
LocusID (NCBI) 283694
Atlas_Id 71346
Location 15q11.2  [Link to chromosome band 15q11]
Location_base_pair Starts at 22094431 and ends at 22095864 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR4N4   15375
Cards
Entrez_Gene (NCBI)OR4N4  283694  olfactory receptor family 4 subfamily N member 4
AliasesOR15-1; OR15-5
GeneCards (Weizmann)OR4N4
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr15:22094431-22095864 [Contig_View]  OR4N4 [Vega]
TCGA cBioPortalOR4N4
AceView (NCBI)OR4N4
Genatlas (Paris)OR4N4
WikiGenes283694
SOURCE (Princeton)OR4N4
Genetics Home Reference (NIH)OR4N4
Genomic and cartography
GoldenPath hg38 (UCSC)OR4N4  -     chr15:22094431-22095864 +  15q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR4N4  -     15q11.2   [Description]    (hg19-Feb_2009)
EnsemblOR4N4 - 15q11.2 [CytoView hg19]  OR4N4 - 15q11.2 [CytoView hg38]
Mapping of homologs : NCBIOR4N4 [Mapview hg19]  OR4N4 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC136597 BC136598 DB515791
RefSeq transcript (Entrez)NM_001005241
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR4N4
Cluster EST : UnigeneHs.525666 [ NCBI ]
CGAP (NCI)Hs.525666
Gene ExpressionOR4N4 [ NCBI-GEO ]   OR4N4 [ EBI - ARRAY_EXPRESS ]   OR4N4 [ SEEK ]   OR4N4 [ MEM ]
Gene Expression Viewer (FireBrowse)OR4N4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)283694
GTEX Portal (Tissue expression)OR4N4
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N0Y3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N0Y3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N0Y3
Splice isoforms : SwissVarQ8N0Y3
PhosPhoSitePlusQ8N0Y3
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR4N4
DMDM Disease mutations283694
Blocks (Seattle)OR4N4
SuperfamilyQ8N0Y3
Peptide AtlasQ8N0Y3
HPRD17731
IPIIPI00295696   
Protein Interaction databases
DIP (DOE-UCLA)Q8N0Y3
IntAct (EBI)Q8N0Y3
BioGRIDOR4N4
STRING (EMBL)OR4N4
ZODIACOR4N4
Ontologies - Pathways
QuickGOQ8N0Y3
Ontology : AmiGOtransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBItransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR4N4
Atlas of Cancer Signalling NetworkOR4N4
Wikipedia pathwaysOR4N4
Orthology - Evolution
OrthoDB283694
Phylogenetic Trees/Animal Genes : TreeFamOR4N4
HOVERGENQ8N0Y3
HOGENOMQ8N0Y3
Homologs : HomoloGeneOR4N4
Homology/Alignments : Family Browser (UCSC)OR4N4
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR4N4 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR4N4
dbVarOR4N4
ClinVarOR4N4
1000_GenomesOR4N4 
Exome Variant ServerOR4N4
ExAC (Exome Aggregation Consortium)OR4N4 (select the gene name)
Genetic variants : HAPMAP283694
Genomic Variants (DGV)OR4N4 [DGVbeta]
DECIPHEROR4N4 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR4N4 
Mutations
ICGC Data PortalOR4N4 
TCGA Data PortalOR4N4 
Broad Tumor PortalOR4N4
OASIS PortalOR4N4 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR4N4  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR4N4
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR4N4
DgiDB (Drug Gene Interaction Database)OR4N4
DoCM (Curated mutations)OR4N4 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR4N4 (select a term)
intoGenOR4N4
Cancer3DOR4N4(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR4N4
Genetic Testing Registry OR4N4
NextProtQ8N0Y3 [Medical]
TSGene283694
GENETestsOR4N4
Target ValidationOR4N4
Huge Navigator OR4N4 [HugePedia]
snp3D : Map Gene to Disease283694
BioCentury BCIQOR4N4
ClinGenOR4N4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD283694
Chemical/Pharm GKB GenePA32332
Clinical trialOR4N4
Miscellaneous
canSAR (ICR)OR4N4 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR4N4
EVEXOR4N4
GoPubMedOR4N4
iHOPOR4N4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:34:25 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.