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OR4N5 (olfactory receptor family 4 subfamily N member 5)

Identity

Alias_namesolfactory receptor, family 4, subfamily N, member 5
Other alias-
HGNC (Hugo) OR4N5
LocusID (NCBI) 390437
Atlas_Id 71347
Location 14q11.2  [Link to chromosome band 14q11]
Location_base_pair Starts at 20143736 and ends at 20144662 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR4N5   15358
Cards
Entrez_Gene (NCBI)OR4N5  390437  olfactory receptor family 4 subfamily N member 5
Aliases
GeneCards (Weizmann)OR4N5
Ensembl hg19 (Hinxton)ENSG00000184394 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000184394 [Gene_View]  chr14:20143736-20144662 [Contig_View]  OR4N5 [Vega]
ICGC DataPortalENSG00000184394
TCGA cBioPortalOR4N5
AceView (NCBI)OR4N5
Genatlas (Paris)OR4N5
WikiGenes390437
SOURCE (Princeton)OR4N5
Genetics Home Reference (NIH)OR4N5
Genomic and cartography
GoldenPath hg38 (UCSC)OR4N5  -     chr14:20143736-20144662 +  14q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR4N5  -     14q11.2   [Description]    (hg19-Feb_2009)
EnsemblOR4N5 - 14q11.2 [CytoView hg19]  OR4N5 - 14q11.2 [CytoView hg38]
Mapping of homologs : NCBIOR4N5 [Mapview hg19]  OR4N5 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001004724
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR4N5
Cluster EST : UnigeneHs.553766 [ NCBI ]
CGAP (NCI)Hs.553766
Alternative Splicing GalleryENSG00000184394
Gene ExpressionOR4N5 [ NCBI-GEO ]   OR4N5 [ EBI - ARRAY_EXPRESS ]   OR4N5 [ SEEK ]   OR4N5 [ MEM ]
Gene Expression Viewer (FireBrowse)OR4N5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)390437
GTEX Portal (Tissue expression)OR4N5
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IXE1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IXE1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IXE1
Splice isoforms : SwissVarQ8IXE1
PhosPhoSitePlusQ8IXE1
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR4N5
DMDM Disease mutations390437
Blocks (Seattle)OR4N5
SuperfamilyQ8IXE1
Human Protein AtlasENSG00000184394
Peptide AtlasQ8IXE1
HPRD14985
IPIIPI00217508   
Protein Interaction databases
DIP (DOE-UCLA)Q8IXE1
IntAct (EBI)Q8IXE1
FunCoupENSG00000184394
BioGRIDOR4N5
STRING (EMBL)OR4N5
ZODIACOR4N5
Ontologies - Pathways
QuickGOQ8IXE1
Ontology : AmiGOtransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBItransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR4N5
Atlas of Cancer Signalling NetworkOR4N5
Wikipedia pathwaysOR4N5
Orthology - Evolution
OrthoDB390437
GeneTree (enSembl)ENSG00000184394
Phylogenetic Trees/Animal Genes : TreeFamOR4N5
HOVERGENQ8IXE1
HOGENOMQ8IXE1
Homologs : HomoloGeneOR4N5
Homology/Alignments : Family Browser (UCSC)OR4N5
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR4N5 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR4N5
dbVarOR4N5
ClinVarOR4N5
1000_GenomesOR4N5 
Exome Variant ServerOR4N5
ExAC (Exome Aggregation Consortium)OR4N5 (select the gene name)
Genetic variants : HAPMAP390437
Genomic Variants (DGV)OR4N5 [DGVbeta]
DECIPHEROR4N5 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR4N5 
Mutations
ICGC Data PortalOR4N5 
TCGA Data PortalOR4N5 
Broad Tumor PortalOR4N5
OASIS PortalOR4N5 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR4N5  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR4N5
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR4N5
DgiDB (Drug Gene Interaction Database)OR4N5
DoCM (Curated mutations)OR4N5 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR4N5 (select a term)
intoGenOR4N5
Cancer3DOR4N5(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR4N5
Genetic Testing Registry OR4N5
NextProtQ8IXE1 [Medical]
TSGene390437
GENETestsOR4N5
Target ValidationOR4N5
Huge Navigator OR4N5 [HugePedia]
snp3D : Map Gene to Disease390437
BioCentury BCIQOR4N5
ClinGenOR4N5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD390437
Chemical/Pharm GKB GenePA32333
Clinical trialOR4N5
Miscellaneous
canSAR (ICR)OR4N5 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR4N5
EVEXOR4N5
GoPubMedOR4N5
iHOPOR4N5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:34:25 CEST 2017

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