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OR4Q2 (olfactory receptor family 4 subfamily Q member 2 (gene/pseudogene))

Identity

Alias_namesOR4Q2P
olfactory receptor, family 4, subfamily Q, member 2 pseudogene
olfactory receptor, family 4, subfamily Q, member 2 (gene/pseudogene)
Other alias
HGNC (Hugo) OR4Q2
LocusID (NCBI) 390432
Atlas_Id 80202
Location 14q11.2  [Link to chromosome band 14q11]
Location_base_pair Starts at 20002062 and ends at 20003192 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR4Q2   15359
Cards
Entrez_Gene (NCBI)OR4Q2  390432  olfactory receptor family 4 subfamily Q member 2 (gene/pseudogene)
AliasesOR4Q2P
GeneCards (Weizmann)OR4Q2
Ensembl hg19 (Hinxton)ENSG00000196383 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000196383 [Gene_View]  chr14:20002062-20003192 [Contig_View]  OR4Q2 [Vega]
ICGC DataPortalENSG00000196383
TCGA cBioPortalOR4Q2
AceView (NCBI)OR4Q2
Genatlas (Paris)OR4Q2
WikiGenes390432
SOURCE (Princeton)OR4Q2
Genetics Home Reference (NIH)OR4Q2
Genomic and cartography
GoldenPath hg38 (UCSC)OR4Q2  -     chr14:20002062-20003192 +  14q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR4Q2  -     14q11.2   [Description]    (hg19-Feb_2009)
EnsemblOR4Q2 - 14q11.2 [CytoView hg19]  OR4Q2 - 14q11.2 [CytoView hg38]
Mapping of homologs : NCBIOR4Q2 [Mapview hg19]  OR4Q2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001348271
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR4Q2
Alternative Splicing GalleryENSG00000196383
Gene ExpressionOR4Q2 [ NCBI-GEO ]   OR4Q2 [ EBI - ARRAY_EXPRESS ]   OR4Q2 [ SEEK ]   OR4Q2 [ MEM ]
Gene Expression Viewer (FireBrowse)OR4Q2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)390432
GTEX Portal (Tissue expression)OR4Q2
Human Protein AtlasENSG00000196383-OR4Q2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP0C623   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP0C623  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP0C623
Splice isoforms : SwissVarP0C623
PhosPhoSitePlusP0C623
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR4Q2
DMDM Disease mutations390432
Blocks (Seattle)OR4Q2
SuperfamilyP0C623
Human Protein Atlas [tissue]ENSG00000196383-OR4Q2 [tissue]
Peptide AtlasP0C623
IPIIPI00878357   
Protein Interaction databases
DIP (DOE-UCLA)P0C623
IntAct (EBI)P0C623
FunCoupENSG00000196383
BioGRIDOR4Q2
STRING (EMBL)OR4Q2
ZODIACOR4Q2
Ontologies - Pathways
QuickGOP0C623
Ontology : AmiGOtransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBItransmembrane signaling receptor activity  G-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception  detection of chemical stimulus involved in sensory perception of smell  
NDEx NetworkOR4Q2
Atlas of Cancer Signalling NetworkOR4Q2
Wikipedia pathwaysOR4Q2
Orthology - Evolution
OrthoDB390432
GeneTree (enSembl)ENSG00000196383
Phylogenetic Trees/Animal Genes : TreeFamOR4Q2
HOVERGENP0C623
HOGENOMP0C623
Homologs : HomoloGeneOR4Q2
Homology/Alignments : Family Browser (UCSC)OR4Q2
Gene fusions - Rearrangements
Tumor Fusion PortalOR4Q2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR4Q2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR4Q2
dbVarOR4Q2
ClinVarOR4Q2
1000_GenomesOR4Q2 
Exome Variant ServerOR4Q2
ExAC (Exome Aggregation Consortium)ENSG00000196383
GNOMAD BrowserENSG00000196383
Genetic variants : HAPMAP390432
Genomic Variants (DGV)OR4Q2 [DGVbeta]
DECIPHEROR4Q2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR4Q2 
Mutations
ICGC Data PortalOR4Q2 
TCGA Data PortalOR4Q2 
Broad Tumor PortalOR4Q2
OASIS PortalOR4Q2 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDOR4Q2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR4Q2
DgiDB (Drug Gene Interaction Database)OR4Q2
DoCM (Curated mutations)OR4Q2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR4Q2 (select a term)
intoGenOR4Q2
Cancer3DOR4Q2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETOR4Q2
MedgenOR4Q2
Genetic Testing Registry OR4Q2
NextProtP0C623 [Medical]
TSGene390432
GENETestsOR4Q2
Target ValidationOR4Q2
Huge Navigator OR4Q2 [HugePedia]
snp3D : Map Gene to Disease390432
BioCentury BCIQOR4Q2
ClinGenOR4Q2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD390432
Chemical/Pharm GKB GenePA32339
Clinical trialOR4Q2
Miscellaneous
canSAR (ICR)OR4Q2 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR4Q2
EVEXOR4Q2
GoPubMedOR4Q2
iHOPOR4Q2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:30:15 CET 2017

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