Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

OR51A2 (olfactory receptor, family 51, subfamily A, member 2)

Identity

Alias_namesolfactory receptor, family 51, subfamily A, member 2
Other alias-
HGNC (Hugo) OR51A2
LocusID (NCBI) 401667
Atlas_Id 71354
Location 11p15.4  [Link to chromosome band 11p15]
Location_base_pair Starts at 4976002 and ends at 4976943 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR51A2   14764
Cards
Entrez_Gene (NCBI)OR51A2  401667  olfactory receptor, family 51, subfamily A, member 2
Aliases
GeneCards (Weizmann)OR51A2
Ensembl hg19 (Hinxton)ENSG00000205496 [Gene_View]  chr11:4976002-4976943 [Contig_View]  OR51A2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000205496 [Gene_View]  chr11:4976002-4976943 [Contig_View]  OR51A2 [Vega]
ICGC DataPortalENSG00000205496
TCGA cBioPortalOR51A2
AceView (NCBI)OR51A2
Genatlas (Paris)OR51A2
WikiGenes401667
SOURCE (Princeton)OR51A2
Genetics Home Reference (NIH)OR51A2
Genomic and cartography
GoldenPath hg19 (UCSC)OR51A2  -     chr11:4976002-4976943 -  11p15.4   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)OR51A2  -     11p15.4   [Description]    (hg38-Dec_2013)
EnsemblOR51A2 - 11p15.4 [CytoView hg19]  OR51A2 - 11p15.4 [CytoView hg38]
Mapping of homologs : NCBIOR51A2 [Mapview hg19]  OR51A2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC148562
RefSeq transcript (Entrez)NM_001004748
RefSeq genomic (Entrez)NC_000011 NC_018922 NT_009237 NW_004929378
Consensus coding sequences : CCDS (NCBI)OR51A2
Cluster EST : UnigeneHs.553805 [ NCBI ]
CGAP (NCI)Hs.553805
Alternative Splicing GalleryENSG00000205496
Gene ExpressionOR51A2 [ NCBI-GEO ]   OR51A2 [ EBI - ARRAY_EXPRESS ]   OR51A2 [ SEEK ]   OR51A2 [ MEM ]
Gene Expression Viewer (FireBrowse)OR51A2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)401667
GTEX Portal (Tissue expression)OR51A2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGJ7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGJ7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGJ7
Splice isoforms : SwissVarQ8NGJ7
PhosPhoSitePlusQ8NGJ7
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)7tm_1 (PF00001)   
Domain families : Pfam (NCBI)pfam00001   
Conserved Domain (NCBI)OR51A2
DMDM Disease mutations401667
Blocks (Seattle)OR51A2
SuperfamilyQ8NGJ7
Human Protein AtlasENSG00000205496
Peptide AtlasQ8NGJ7
HPRD17733
IPIIPI00402206   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGJ7
IntAct (EBI)Q8NGJ7
FunCoupENSG00000205496
BioGRIDOR51A2
STRING (EMBL)OR51A2
ZODIACOR51A2
Ontologies - Pathways
QuickGOQ8NGJ7
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR51A2
Atlas of Cancer Signalling NetworkOR51A2
Wikipedia pathwaysOR51A2
Orthology - Evolution
OrthoDB401667
GeneTree (enSembl)ENSG00000205496
Phylogenetic Trees/Animal Genes : TreeFamOR51A2
HOVERGENQ8NGJ7
HOGENOMQ8NGJ7
Homologs : HomoloGeneOR51A2
Homology/Alignments : Family Browser (UCSC)OR51A2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR51A2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR51A2
dbVarOR51A2
ClinVarOR51A2
1000_GenomesOR51A2 
Exome Variant ServerOR51A2
ExAC (Exome Aggregation Consortium)OR51A2 (select the gene name)
Genetic variants : HAPMAP401667
Genomic Variants (DGV)OR51A2 [DGVbeta]
DECIPHER (Syndromes)11:4976002-4976943  ENSG00000205496
CONAN: Copy Number AnalysisOR51A2 
Mutations
ICGC Data PortalOR51A2 
TCGA Data PortalOR51A2 
Broad Tumor PortalOR51A2
OASIS PortalOR51A2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR51A2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR51A2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR51A2
DgiDB (Drug Gene Interaction Database)OR51A2
DoCM (Curated mutations)OR51A2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR51A2 (select a term)
intoGenOR51A2
Cancer3DOR51A2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR51A2
Genetic Testing Registry OR51A2
NextProtQ8NGJ7 [Medical]
TSGene401667
GENETestsOR51A2
Huge Navigator OR51A2 [HugePedia]
snp3D : Map Gene to Disease401667
BioCentury BCIQOR51A2
ClinGenOR51A2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD401667
Chemical/Pharm GKB GenePA32355
Clinical trialOR51A2
Miscellaneous
canSAR (ICR)OR51A2 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR51A2
EVEXOR51A2
GoPubMedOR51A2
iHOPOR51A2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:36:42 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.