Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

OR51A4 (olfactory receptor family 51 subfamily A member 4)

Identity

Alias_namesolfactory receptor, family 51, subfamily A, member 4
Other alias-
HGNC (Hugo) OR51A4
LocusID (NCBI) 401666
Atlas_Id 71355
Location 11p15.4  [Link to chromosome band 11p15]
Location_base_pair Starts at 4946159 and ends at 4947100 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR51A4   14795
Cards
Entrez_Gene (NCBI)OR51A4  401666  olfactory receptor family 51 subfamily A member 4
Aliases
GeneCards (Weizmann)OR51A4
Ensembl hg19 (Hinxton)ENSG00000205497 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000205497 [Gene_View]  chr11:4946159-4947100 [Contig_View]  OR51A4 [Vega]
ICGC DataPortalENSG00000205497
TCGA cBioPortalOR51A4
AceView (NCBI)OR51A4
Genatlas (Paris)OR51A4
WikiGenes401666
SOURCE (Princeton)OR51A4
Genetics Home Reference (NIH)OR51A4
Genomic and cartography
GoldenPath hg38 (UCSC)OR51A4  -     chr11:4946159-4947100 -  11p15.4   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR51A4  -     11p15.4   [Description]    (hg19-Feb_2009)
EnsemblOR51A4 - 11p15.4 [CytoView hg19]  OR51A4 - 11p15.4 [CytoView hg38]
Mapping of homologs : NCBIOR51A4 [Mapview hg19]  OR51A4 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC140757
RefSeq transcript (Entrez)NM_001005329
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR51A4
Cluster EST : UnigeneHs.555481 [ NCBI ]
CGAP (NCI)Hs.555481
Alternative Splicing GalleryENSG00000205497
Gene ExpressionOR51A4 [ NCBI-GEO ]   OR51A4 [ EBI - ARRAY_EXPRESS ]   OR51A4 [ SEEK ]   OR51A4 [ MEM ]
Gene Expression Viewer (FireBrowse)OR51A4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)401666
GTEX Portal (Tissue expression)OR51A4
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGJ6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGJ6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGJ6
Splice isoforms : SwissVarQ8NGJ6
PhosPhoSitePlusQ8NGJ6
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Domain families : Smart (EMBL)7TM_GPCR_Srsx (SM01381)  
Conserved Domain (NCBI)OR51A4
DMDM Disease mutations401666
Blocks (Seattle)OR51A4
SuperfamilyQ8NGJ6
Human Protein AtlasENSG00000205497
Peptide AtlasQ8NGJ6
HPRD14991
IPIIPI00169038   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGJ6
IntAct (EBI)Q8NGJ6
FunCoupENSG00000205497
BioGRIDOR51A4
STRING (EMBL)OR51A4
ZODIACOR51A4
Ontologies - Pathways
QuickGOQ8NGJ6
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  plasma membrane  signal transduction  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  plasma membrane  signal transduction  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR51A4
Atlas of Cancer Signalling NetworkOR51A4
Wikipedia pathwaysOR51A4
Orthology - Evolution
OrthoDB401666
GeneTree (enSembl)ENSG00000205497
Phylogenetic Trees/Animal Genes : TreeFamOR51A4
HOVERGENQ8NGJ6
HOGENOMQ8NGJ6
Homologs : HomoloGeneOR51A4
Homology/Alignments : Family Browser (UCSC)OR51A4
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR51A4 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR51A4
dbVarOR51A4
ClinVarOR51A4
1000_GenomesOR51A4 
Exome Variant ServerOR51A4
ExAC (Exome Aggregation Consortium)OR51A4 (select the gene name)
Genetic variants : HAPMAP401666
Genomic Variants (DGV)OR51A4 [DGVbeta]
DECIPHEROR51A4 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR51A4 
Mutations
ICGC Data PortalOR51A4 
TCGA Data PortalOR51A4 
Broad Tumor PortalOR51A4
OASIS PortalOR51A4 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR51A4  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR51A4
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR51A4
DgiDB (Drug Gene Interaction Database)OR51A4
DoCM (Curated mutations)OR51A4 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR51A4 (select a term)
intoGenOR51A4
Cancer3DOR51A4(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR51A4
Genetic Testing Registry OR51A4
NextProtQ8NGJ6 [Medical]
TSGene401666
GENETestsOR51A4
Target ValidationOR51A4
Huge Navigator OR51A4 [HugePedia]
snp3D : Map Gene to Disease401666
BioCentury BCIQOR51A4
ClinGenOR51A4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD401666
Chemical/Pharm GKB GenePA32357
Clinical trialOR51A4
Miscellaneous
canSAR (ICR)OR51A4 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR51A4
EVEXOR51A4
GoPubMedOR51A4
iHOPOR51A4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:33:13 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.