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OR51A4 (olfactory receptor family 51 subfamily A member 4)

Identity

Alias (NCBI)-
HGNC (Hugo) OR51A4
HGNC Previous nameolfactory receptor, family 51, subfamily A, member 4
LocusID (NCBI) 401666
Atlas_Id 71355
Location 11p15.4  [Link to chromosome band 11p15]
Location_base_pair Starts at 4946159 and ends at 4947100 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)OR51A4   14795
Cards
Entrez_Gene (NCBI)OR51A4    olfactory receptor family 51 subfamily A member 4
Aliases
GeneCards (Weizmann)OR51A4
Ensembl hg19 (Hinxton)ENSG00000205497 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000205497 [Gene_View]  ENSG00000205497 [Sequence]  chr11:4946159-4947100 [Contig_View]  OR51A4 [Vega]
ICGC DataPortalENSG00000205497
TCGA cBioPortalOR51A4
AceView (NCBI)OR51A4
Genatlas (Paris)OR51A4
SOURCE (Princeton)OR51A4
Genetics Home Reference (NIH)OR51A4
Genomic and cartography
GoldenPath hg38 (UCSC)OR51A4  -     chr11:4946159-4947100 -  11p15.4   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR51A4  -     11p15.4   [Description]    (hg19-Feb_2009)
GoldenPathOR51A4 - 11p15.4 [CytoView hg19]  OR51A4 - 11p15.4 [CytoView hg38]
ImmunoBaseENSG00000205497
genome Data Viewer NCBIOR51A4 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BC140757
RefSeq transcript (Entrez)NM_001005329
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR51A4
Alternative Splicing GalleryENSG00000205497
Gene ExpressionOR51A4 [ NCBI-GEO ]   OR51A4 [ EBI - ARRAY_EXPRESS ]   OR51A4 [ SEEK ]   OR51A4 [ MEM ]
Gene Expression Viewer (FireBrowse)OR51A4 [ Firebrowse - Broad ]
GenevisibleExpression of OR51A4 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)401666
GTEX Portal (Tissue expression)OR51A4
Human Protein AtlasENSG00000205497-OR51A4 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGJ6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGJ6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGJ6
Splice isoforms : SwissVarQ8NGJ6
PhosPhoSitePlusQ8NGJ6
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)7tm_4 (PF13853)   
Domain families : Pfam (NCBI)pfam13853   
Domain families : Smart (EMBL)7TM_GPCR_Srsx (SM01381)  
Conserved Domain (NCBI)OR51A4
Blocks (Seattle)OR51A4
SuperfamilyQ8NGJ6
Human Protein Atlas [tissue]ENSG00000205497-OR51A4 [tissue]
Peptide AtlasQ8NGJ6
HPRD14991
IPIIPI00169038   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGJ6
IntAct (EBI)Q8NGJ6
BioGRIDOR51A4
STRING (EMBL)OR51A4
ZODIACOR51A4
Ontologies - Pathways
QuickGOQ8NGJ6
Ontology : AmiGOG protein-coupled receptor activity  olfactory receptor activity  plasma membrane  plasma membrane  G protein-coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG protein-coupled receptor activity  olfactory receptor activity  plasma membrane  plasma membrane  G protein-coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
NDEx NetworkOR51A4
Atlas of Cancer Signalling NetworkOR51A4
Wikipedia pathwaysOR51A4
Orthology - Evolution
OrthoDB401666
GeneTree (enSembl)ENSG00000205497
Phylogenetic Trees/Animal Genes : TreeFamOR51A4
HOGENOMQ8NGJ6
Homologs : HomoloGeneOR51A4
Homology/Alignments : Family Browser (UCSC)OR51A4
Gene fusions - Rearrangements
Fusion : QuiverOR51A4
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR51A4 [hg38]
dbVarOR51A4
ClinVarOR51A4
MonarchOR51A4
1000_GenomesOR51A4 
Exome Variant ServerOR51A4
GNOMAD BrowserENSG00000205497
Varsome BrowserOR51A4
Genomic Variants (DGV)OR51A4 [DGVbeta]
DECIPHEROR51A4 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR51A4 
Mutations
ICGC Data PortalOR51A4 
TCGA Data PortalOR51A4 
Broad Tumor PortalOR51A4
OASIS PortalOR51A4 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR51A4  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DOR51A4
Mutations and Diseases : HGMDOR51A4
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR51A4
DgiDB (Drug Gene Interaction Database)OR51A4
DoCM (Curated mutations)OR51A4 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR51A4 (select a term)
intoGenOR51A4
Cancer3DOR51A4(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETOR51A4
MedgenOR51A4
Genetic Testing Registry OR51A4
NextProtQ8NGJ6 [Medical]
GENETestsOR51A4
Target ValidationOR51A4
Huge Navigator OR51A4 [HugePedia]
ClinGenOR51A4
Clinical trials, drugs, therapy
MyCancerGenomeOR51A4
Protein Interactions : CTD
Pharm GKB GenePA32357
Clinical trialOR51A4
Miscellaneous
canSAR (ICR)OR51A4 (select the gene name)
HarmonizomeOR51A4
DataMed IndexOR51A4
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR51A4
EVEXOR51A4
GoPubMedOR51A4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Dec 5 17:20:47 CET 2020

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