Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

OR51B2 (olfactory receptor family 51 subfamily B member 2 (gene/pseudogene))

Identity

Alias_namesOR51B1P
olfactory receptor, family 51, subfamily B, member 2 (gene/pseudogene)
Other aliasHOR5'Beta3
HGNC (Hugo) OR51B2
LocusID (NCBI) 79345
Atlas_Id 71357
Location 11p15.4  [Link to chromosome band 11p15]
Location_base_pair Starts at 5323298 and ends at 5324352 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR51B2   14703
Cards
Entrez_Gene (NCBI)OR51B2  79345  olfactory receptor family 51 subfamily B member 2 (gene/pseudogene)
AliasesHOR5'Beta3; OR51B1P
GeneCards (Weizmann)OR51B2
Ensembl hg19 (Hinxton)ENSG00000184881 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000184881 [Gene_View]  chr11:5323298-5324352 [Contig_View]  OR51B2 [Vega]
ICGC DataPortalENSG00000184881
TCGA cBioPortalOR51B2
AceView (NCBI)OR51B2
Genatlas (Paris)OR51B2
WikiGenes79345
SOURCE (Princeton)OR51B2
Genetics Home Reference (NIH)OR51B2
Genomic and cartography
GoldenPath hg38 (UCSC)OR51B2  -     chr11:5323298-5324352 -  11p15.4   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR51B2  -     11p15.4   [Description]    (hg19-Feb_2009)
EnsemblOR51B2 - 11p15.4 [CytoView hg19]  OR51B2 - 11p15.4 [CytoView hg38]
Mapping of homologs : NCBIOR51B2 [Mapview hg19]  OR51B2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC117461 HQ258158
RefSeq transcript (Entrez)NM_033180
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR51B2
Cluster EST : UnigeneHs.680163 [ NCBI ]
CGAP (NCI)Hs.680163
Alternative Splicing GalleryENSG00000184881
Gene ExpressionOR51B2 [ NCBI-GEO ]   OR51B2 [ EBI - ARRAY_EXPRESS ]   OR51B2 [ SEEK ]   OR51B2 [ MEM ]
Gene Expression Viewer (FireBrowse)OR51B2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79345
GTEX Portal (Tissue expression)OR51B2
Human Protein AtlasENSG00000184881-OR51B2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y5P1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9Y5P1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9Y5P1
Splice isoforms : SwissVarQ9Y5P1
PhosPhoSitePlusQ9Y5P1
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR51B2
DMDM Disease mutations79345
Blocks (Seattle)OR51B2
SuperfamilyQ9Y5P1
Human Protein Atlas [tissue]ENSG00000184881-OR51B2 [tissue]
Peptide AtlasQ9Y5P1
HPRD17734
IPIIPI00295119   
Protein Interaction databases
DIP (DOE-UCLA)Q9Y5P1
IntAct (EBI)Q9Y5P1
FunCoupENSG00000184881
BioGRIDOR51B2
STRING (EMBL)OR51B2
ZODIACOR51B2
Ontologies - Pathways
QuickGOQ9Y5P1
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  plasma membrane  signal transduction  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  plasma membrane  signal transduction  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR51B2
Atlas of Cancer Signalling NetworkOR51B2
Wikipedia pathwaysOR51B2
Orthology - Evolution
OrthoDB79345
GeneTree (enSembl)ENSG00000184881
Phylogenetic Trees/Animal Genes : TreeFamOR51B2
HOVERGENQ9Y5P1
HOGENOMQ9Y5P1
Homologs : HomoloGeneOR51B2
Homology/Alignments : Family Browser (UCSC)OR51B2
Gene fusions - Rearrangements
Fusion: Tumor Portal OR51B2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR51B2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR51B2
dbVarOR51B2
ClinVarOR51B2
1000_GenomesOR51B2 
Exome Variant ServerOR51B2
ExAC (Exome Aggregation Consortium)ENSG00000184881
GNOMAD BrowserENSG00000184881
Genetic variants : HAPMAP79345
Genomic Variants (DGV)OR51B2 [DGVbeta]
DECIPHEROR51B2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR51B2 
Mutations
ICGC Data PortalOR51B2 
TCGA Data PortalOR51B2 
Broad Tumor PortalOR51B2
OASIS PortalOR51B2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR51B2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR51B2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR51B2
DgiDB (Drug Gene Interaction Database)OR51B2
DoCM (Curated mutations)OR51B2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR51B2 (select a term)
intoGenOR51B2
Cancer3DOR51B2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR51B2
Genetic Testing Registry OR51B2
NextProtQ9Y5P1 [Medical]
TSGene79345
GENETestsOR51B2
Target ValidationOR51B2
Huge Navigator OR51B2 [HugePedia]
snp3D : Map Gene to Disease79345
BioCentury BCIQOR51B2
ClinGenOR51B2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79345
Chemical/Pharm GKB GenePA32364
Clinical trialOR51B2
Miscellaneous
canSAR (ICR)OR51B2 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR51B2
EVEXOR51B2
GoPubMedOR51B2
iHOPOR51B2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:20:41 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.