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OR51B6 (olfactory receptor family 51 subfamily B member 6)

Identity

Alias_namesolfactory receptor, family 51, subfamily B, member 6
Other aliasHOR5'Beta6
HGNC (Hugo) OR51B6
LocusID (NCBI) 390058
Atlas_Id 71360
Location 11p15.4  [Link to chromosome band 11p15]
Location_base_pair Starts at 5351508 and ends at 5352446 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR51B6   19600
Cards
Entrez_Gene (NCBI)OR51B6  390058  olfactory receptor family 51 subfamily B member 6
AliasesHOR5'Beta6
GeneCards (Weizmann)OR51B6
Ensembl hg19 (Hinxton)ENSG00000176239 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000176239 [Gene_View]  chr11:5351508-5352446 [Contig_View]  OR51B6 [Vega]
ICGC DataPortalENSG00000176239
TCGA cBioPortalOR51B6
AceView (NCBI)OR51B6
Genatlas (Paris)OR51B6
WikiGenes390058
SOURCE (Princeton)OR51B6
Genetics Home Reference (NIH)OR51B6
Genomic and cartography
GoldenPath hg38 (UCSC)OR51B6  -     chr11:5351508-5352446 +  11p15.4   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR51B6  -     11p15.4   [Description]    (hg19-Feb_2009)
EnsemblOR51B6 - 11p15.4 [CytoView hg19]  OR51B6 - 11p15.4 [CytoView hg38]
Mapping of homologs : NCBIOR51B6 [Mapview hg19]  OR51B6 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC148509 BC153109
RefSeq transcript (Entrez)NM_001004750
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR51B6
Cluster EST : UnigeneHs.553730 [ NCBI ]
CGAP (NCI)Hs.553730
Alternative Splicing GalleryENSG00000176239
Gene ExpressionOR51B6 [ NCBI-GEO ]   OR51B6 [ EBI - ARRAY_EXPRESS ]   OR51B6 [ SEEK ]   OR51B6 [ MEM ]
Gene Expression Viewer (FireBrowse)OR51B6 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)390058
GTEX Portal (Tissue expression)OR51B6
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H340   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H340  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H340
Splice isoforms : SwissVarQ9H340
PhosPhoSitePlusQ9H340
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR51B6
DMDM Disease mutations390058
Blocks (Seattle)OR51B6
SuperfamilyQ9H340
Human Protein AtlasENSG00000176239
Peptide AtlasQ9H340
HPRD14994
IPIIPI00023118   IPI01014724   
Protein Interaction databases
DIP (DOE-UCLA)Q9H340
IntAct (EBI)Q9H340
FunCoupENSG00000176239
BioGRIDOR51B6
STRING (EMBL)OR51B6
ZODIACOR51B6
Ontologies - Pathways
QuickGOQ9H340
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  olfactory receptor activity  plasma membrane  plasma membrane  signal transduction  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  olfactory receptor activity  plasma membrane  plasma membrane  signal transduction  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR51B6
Atlas of Cancer Signalling NetworkOR51B6
Wikipedia pathwaysOR51B6
Orthology - Evolution
OrthoDB390058
GeneTree (enSembl)ENSG00000176239
Phylogenetic Trees/Animal Genes : TreeFamOR51B6
HOVERGENQ9H340
HOGENOMQ9H340
Homologs : HomoloGeneOR51B6
Homology/Alignments : Family Browser (UCSC)OR51B6
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR51B6 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR51B6
dbVarOR51B6
ClinVarOR51B6
1000_GenomesOR51B6 
Exome Variant ServerOR51B6
ExAC (Exome Aggregation Consortium)OR51B6 (select the gene name)
Genetic variants : HAPMAP390058
Genomic Variants (DGV)OR51B6 [DGVbeta]
DECIPHEROR51B6 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR51B6 
Mutations
ICGC Data PortalOR51B6 
TCGA Data PortalOR51B6 
Broad Tumor PortalOR51B6
OASIS PortalOR51B6 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR51B6  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR51B6
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR51B6
DgiDB (Drug Gene Interaction Database)OR51B6
DoCM (Curated mutations)OR51B6 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR51B6 (select a term)
intoGenOR51B6
Cancer3DOR51B6(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR51B6
Genetic Testing Registry OR51B6
NextProtQ9H340 [Medical]
TSGene390058
GENETestsOR51B6
Target ValidationOR51B6
Huge Navigator OR51B6 [HugePedia]
snp3D : Map Gene to Disease390058
BioCentury BCIQOR51B6
ClinGenOR51B6
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD390058
Chemical/Pharm GKB GenePA134989095
Clinical trialOR51B6
Miscellaneous
canSAR (ICR)OR51B6 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR51B6
EVEXOR51B6
GoPubMedOR51B6
iHOPOR51B6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:34:28 CEST 2017

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