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OR51D1 (olfactory receptor family 51 subfamily D member 1)

Identity

Alias_namesolfactory receptor, family 51, subfamily D, member 1
Alias_symbol (synonym)OR51D1Q
Other aliasOR11-14
HGNC (Hugo) OR51D1
LocusID (NCBI) 390038
Atlas_Id 71361
Location 11p15.4  [Link to chromosome band 11p15]
Location_base_pair Starts at 4639715 and ends at 4640838 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR51D1   15193
Cards
Entrez_Gene (NCBI)OR51D1  390038  olfactory receptor family 51 subfamily D member 1
AliasesOR11-14; OR51D1Q
GeneCards (Weizmann)OR51D1
Ensembl hg19 (Hinxton)ENSG00000197428 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000197428 [Gene_View]  chr11:4639715-4640838 [Contig_View]  OR51D1 [Vega]
ICGC DataPortalENSG00000197428
TCGA cBioPortalOR51D1
AceView (NCBI)OR51D1
Genatlas (Paris)OR51D1
WikiGenes390038
SOURCE (Princeton)OR51D1
Genetics Home Reference (NIH)OR51D1
Genomic and cartography
GoldenPath hg38 (UCSC)OR51D1  -     chr11:4639715-4640838 +  11p15.4   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR51D1  -     11p15.4   [Description]    (hg19-Feb_2009)
EnsemblOR51D1 - 11p15.4 [CytoView hg19]  OR51D1 - 11p15.4 [CytoView hg38]
Mapping of homologs : NCBIOR51D1 [Mapview hg19]  OR51D1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC140717
RefSeq transcript (Entrez)NM_001004751
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR51D1
Cluster EST : UnigeneHs.553728 [ NCBI ]
CGAP (NCI)Hs.553728
Alternative Splicing GalleryENSG00000197428
Gene ExpressionOR51D1 [ NCBI-GEO ]   OR51D1 [ EBI - ARRAY_EXPRESS ]   OR51D1 [ SEEK ]   OR51D1 [ MEM ]
Gene Expression Viewer (FireBrowse)OR51D1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)390038
GTEX Portal (Tissue expression)OR51D1
Human Protein AtlasENSG00000197428-OR51D1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGF3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGF3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGF3
Splice isoforms : SwissVarQ8NGF3
PhosPhoSitePlusQ8NGF3
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR51D1
DMDM Disease mutations390038
Blocks (Seattle)OR51D1
SuperfamilyQ8NGF3
Human Protein Atlas [tissue]ENSG00000197428-OR51D1 [tissue]
Peptide AtlasQ8NGF3
HPRD14995
IPIIPI00375703   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGF3
IntAct (EBI)Q8NGF3
FunCoupENSG00000197428
BioGRIDOR51D1
STRING (EMBL)OR51D1
ZODIACOR51D1
Ontologies - Pathways
QuickGOQ8NGF3
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  plasma membrane  signal transduction  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  plasma membrane  signal transduction  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR51D1
Atlas of Cancer Signalling NetworkOR51D1
Wikipedia pathwaysOR51D1
Orthology - Evolution
OrthoDB390038
GeneTree (enSembl)ENSG00000197428
Phylogenetic Trees/Animal Genes : TreeFamOR51D1
HOVERGENQ8NGF3
HOGENOMQ8NGF3
Homologs : HomoloGeneOR51D1
Homology/Alignments : Family Browser (UCSC)OR51D1
Gene fusions - Rearrangements
Tumor Fusion PortalOR51D1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR51D1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR51D1
dbVarOR51D1
ClinVarOR51D1
1000_GenomesOR51D1 
Exome Variant ServerOR51D1
ExAC (Exome Aggregation Consortium)ENSG00000197428
GNOMAD BrowserENSG00000197428
Genetic variants : HAPMAP390038
Genomic Variants (DGV)OR51D1 [DGVbeta]
DECIPHEROR51D1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR51D1 
Mutations
ICGC Data PortalOR51D1 
TCGA Data PortalOR51D1 
Broad Tumor PortalOR51D1
OASIS PortalOR51D1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR51D1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR51D1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR51D1
DgiDB (Drug Gene Interaction Database)OR51D1
DoCM (Curated mutations)OR51D1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR51D1 (select a term)
intoGenOR51D1
Cancer3DOR51D1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETOR51D1
MedgenOR51D1
Genetic Testing Registry OR51D1
NextProtQ8NGF3 [Medical]
TSGene390038
GENETestsOR51D1
Target ValidationOR51D1
Huge Navigator OR51D1 [HugePedia]
snp3D : Map Gene to Disease390038
BioCentury BCIQOR51D1
ClinGenOR51D1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD390038
Chemical/Pharm GKB GenePA32370
Clinical trialOR51D1
Miscellaneous
canSAR (ICR)OR51D1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR51D1
EVEXOR51D1
GoPubMedOR51D1
iHOPOR51D1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:24:31 CET 2017

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