Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

OR51E1 (olfactory receptor family 51 subfamily E member 1)

Identity

Alias_namesOR51E1P
OR52A3P
GPR164
olfactory receptor, family 51, subfamily E, member 1 pseudogene
olfactory receptor, family 51, subfamily E, member 1
Alias_symbol (synonym)GPR136
Other aliasD-GPCR
DGPCR
POGR
PSGR2
HGNC (Hugo) OR51E1
LocusID (NCBI) 143503
Atlas_Id 45731
Location 11p15.4  [Link to chromosome band 11p15]
Location_base_pair Starts at 4665156 and ends at 4676716 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR51E1   15194
Cards
Entrez_Gene (NCBI)OR51E1  143503  olfactory receptor family 51 subfamily E member 1
AliasesD-GPCR; DGPCR; GPR136; GPR164; 
OR51E1P; OR52A3P; POGR; PSGR2
GeneCards (Weizmann)OR51E1
Ensembl hg19 (Hinxton)ENSG00000180785 [Gene_View]  chr11:4665156-4676716 [Contig_View]  OR51E1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000180785 [Gene_View]  chr11:4665156-4676716 [Contig_View]  OR51E1 [Vega]
ICGC DataPortalENSG00000180785
TCGA cBioPortalOR51E1
AceView (NCBI)OR51E1
Genatlas (Paris)OR51E1
WikiGenes143503
SOURCE (Princeton)OR51E1
Genetics Home Reference (NIH)OR51E1
Genomic and cartography
GoldenPath hg19 (UCSC)OR51E1  -     chr11:4665156-4676716 +  11p15.4   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)OR51E1  -     11p15.4   [Description]    (hg38-Dec_2013)
EnsemblOR51E1 - 11p15.4 [CytoView hg19]  OR51E1 - 11p15.4 [CytoView hg38]
Mapping of homologs : NCBIOR51E1 [Mapview hg19]  OR51E1 [Mapview hg38]
OMIM611267   
Gene and transcription
Genbank (Entrez)AK023643 AK293091 AL833127 AY698056 AY775731
RefSeq transcript (Entrez)NM_152430
RefSeq genomic (Entrez)NC_000011 NC_018922 NT_009237 NW_004929378
Consensus coding sequences : CCDS (NCBI)OR51E1
Cluster EST : UnigeneHs.470038 [ NCBI ]
CGAP (NCI)Hs.470038
Alternative Splicing GalleryENSG00000180785
Gene ExpressionOR51E1 [ NCBI-GEO ]   OR51E1 [ EBI - ARRAY_EXPRESS ]   OR51E1 [ SEEK ]   OR51E1 [ MEM ]
Gene Expression Viewer (FireBrowse)OR51E1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)143503
GTEX Portal (Tissue expression)OR51E1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8TCB6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8TCB6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8TCB6
Splice isoforms : SwissVarQ8TCB6
PhosPhoSitePlusQ8TCB6
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR51E1
DMDM Disease mutations143503
Blocks (Seattle)OR51E1
SuperfamilyQ8TCB6
Human Protein AtlasENSG00000180785
Peptide AtlasQ8TCB6
HPRD14996
IPIIPI00549411   IPI00978747   
Protein Interaction databases
DIP (DOE-UCLA)Q8TCB6
IntAct (EBI)Q8TCB6
FunCoupENSG00000180785
BioGRIDOR51E1
STRING (EMBL)OR51E1
ZODIACOR51E1
Ontologies - Pathways
QuickGOQ8TCB6
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  plasma membrane  signal transduction  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  plasma membrane  signal transduction  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR51E1
Atlas of Cancer Signalling NetworkOR51E1
Wikipedia pathwaysOR51E1
Orthology - Evolution
OrthoDB143503
GeneTree (enSembl)ENSG00000180785
Phylogenetic Trees/Animal Genes : TreeFamOR51E1
HOVERGENQ8TCB6
HOGENOMQ8TCB6
Homologs : HomoloGeneOR51E1
Homology/Alignments : Family Browser (UCSC)OR51E1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR51E1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR51E1
dbVarOR51E1
ClinVarOR51E1
1000_GenomesOR51E1 
Exome Variant ServerOR51E1
ExAC (Exome Aggregation Consortium)OR51E1 (select the gene name)
Genetic variants : HAPMAP143503
Genomic Variants (DGV)OR51E1 [DGVbeta]
DECIPHER (Syndromes)11:4665156-4676716  ENSG00000180785
CONAN: Copy Number AnalysisOR51E1 
Mutations
ICGC Data PortalOR51E1 
TCGA Data PortalOR51E1 
Broad Tumor PortalOR51E1
OASIS PortalOR51E1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR51E1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR51E1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR51E1
DgiDB (Drug Gene Interaction Database)OR51E1
DoCM (Curated mutations)OR51E1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR51E1 (select a term)
intoGenOR51E1
Cancer3DOR51E1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611267   
Orphanet
MedgenOR51E1
Genetic Testing Registry OR51E1
NextProtQ8TCB6 [Medical]
TSGene143503
GENETestsOR51E1
Huge Navigator OR51E1 [HugePedia]
snp3D : Map Gene to Disease143503
BioCentury BCIQOR51E1
ClinGenOR51E1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD143503
Chemical/Pharm GKB GenePA32371
Clinical trialOR51E1
Miscellaneous
canSAR (ICR)OR51E1 (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR51E1
EVEXOR51E1
GoPubMedOR51E1
iHOPOR51E1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 13:19:53 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.