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OR51F1 (olfactory receptor family 51 subfamily F member 1 (gene/pseudogene))

Identity

Alias (NCBI)OR11-21
OR51F1P
HGNC (Hugo) OR51F1
HGNC Previous nameOR51F1P
HGNC Previous nameolfactory receptor, family 51, subfamily F, member 1 (gene/pseudogene)
LocusID (NCBI) 256892
Atlas_Id 71362
Location 11p15.4  [Link to chromosome band 11p15]
Location_base_pair Starts at 4768979 and ends at 4769917 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)OR51F1   15196
Cards
Entrez_Gene (NCBI)OR51F1    olfactory receptor family 51 subfamily F member 1 (gene/pseudogene)
AliasesOR11-21; OR51F1P
GeneCards (Weizmann)OR51F1
Ensembl hg19 (Hinxton)ENSG00000280021 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000280021 [Gene_View]  ENSG00000280021 [Sequence]  chr11:4768979-4769917 [Contig_View]  OR51F1 [Vega]
ICGC DataPortalENSG00000280021
TCGA cBioPortalOR51F1
AceView (NCBI)OR51F1
Genatlas (Paris)OR51F1
SOURCE (Princeton)OR51F1
Genetics Home Reference (NIH)OR51F1
Genomic and cartography
GoldenPath hg38 (UCSC)OR51F1  -     chr11:4768979-4769917 -  11p15.4   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR51F1  -     11p15.4   [Description]    (hg19-Feb_2009)
GoldenPathOR51F1 - 11p15.4 [CytoView hg19]  OR51F1 - 11p15.4 [CytoView hg38]
ImmunoBaseENSG00000280021
genome Data Viewer NCBIOR51F1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001004752
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR51F1
Alternative Splicing GalleryENSG00000280021
Gene ExpressionOR51F1 [ NCBI-GEO ]   OR51F1 [ EBI - ARRAY_EXPRESS ]   OR51F1 [ SEEK ]   OR51F1 [ MEM ]
Gene Expression Viewer (FireBrowse)OR51F1 [ Firebrowse - Broad ]
GenevisibleExpression of OR51F1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)256892
GTEX Portal (Tissue expression)OR51F1
Human Protein AtlasENSG00000280021-OR51F1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NGY5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NGY5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NGY5
Splice isoforms : SwissVarA6NGY5
PhosPhoSitePlusA6NGY5
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)7tm_4 (PF13853)   
Domain families : Pfam (NCBI)pfam13853   
Conserved Domain (NCBI)OR51F1
Blocks (Seattle)OR51F1
SuperfamilyA6NGY5
Human Protein Atlas [tissue]ENSG00000280021-OR51F1 [tissue]
Peptide AtlasA6NGY5
HPRD17737
IPIIPI00160814   IPI00936822   
Protein Interaction databases
DIP (DOE-UCLA)A6NGY5
IntAct (EBI)A6NGY5
BioGRIDOR51F1
STRING (EMBL)OR51F1
ZODIACOR51F1
Ontologies - Pathways
QuickGOA6NGY5
Ontology : AmiGOG protein-coupled receptor activity  olfactory receptor activity  plasma membrane  plasma membrane  G protein-coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG protein-coupled receptor activity  olfactory receptor activity  plasma membrane  plasma membrane  G protein-coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
NDEx NetworkOR51F1
Atlas of Cancer Signalling NetworkOR51F1
Wikipedia pathwaysOR51F1
Orthology - Evolution
OrthoDB256892
GeneTree (enSembl)ENSG00000280021
Phylogenetic Trees/Animal Genes : TreeFamOR51F1
HOGENOMA6NGY5
Homologs : HomoloGeneOR51F1
Homology/Alignments : Family Browser (UCSC)OR51F1
Gene fusions - Rearrangements
Fusion : QuiverOR51F1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR51F1 [hg38]
dbVarOR51F1
ClinVarOR51F1
MonarchOR51F1
1000_GenomesOR51F1 
Exome Variant ServerOR51F1
GNOMAD BrowserENSG00000280021
Varsome BrowserOR51F1
Genomic Variants (DGV)OR51F1 [DGVbeta]
DECIPHEROR51F1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR51F1 
Mutations
ICGC Data PortalOR51F1 
TCGA Data PortalOR51F1 
Broad Tumor PortalOR51F1
OASIS PortalOR51F1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR51F1  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DOR51F1
Mutations and Diseases : HGMDOR51F1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR51F1
DgiDB (Drug Gene Interaction Database)OR51F1
DoCM (Curated mutations)OR51F1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR51F1 (select a term)
intoGenOR51F1
Cancer3DOR51F1(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETOR51F1
MedgenOR51F1
Genetic Testing Registry OR51F1
NextProtA6NGY5 [Medical]
GENETestsOR51F1
Target ValidationOR51F1
Huge Navigator OR51F1 [HugePedia]
ClinGenOR51F1
Clinical trials, drugs, therapy
MyCancerGenomeOR51F1
Protein Interactions : CTD
Pharm GKB GenePA32374
Clinical trialOR51F1
Miscellaneous
canSAR (ICR)OR51F1 (select the gene name)
HarmonizomeOR51F1
DataMed IndexOR51F1
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR51F1
EVEXOR51F1
GoPubMedOR51F1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Dec 5 17:20:48 CET 2020

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