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OR51F2 (olfactory receptor family 51 subfamily F member 2)

Identity

Alias_namesolfactory receptor, family 51, subfamily F, member 2
Other aliasOR11-23
HGNC (Hugo) OR51F2
LocusID (NCBI) 119694
Atlas_Id 71363
Location 11p15.4  [Link to chromosome band 11p15]
Location_base_pair Starts at 4821386 and ends at 4822414 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR51F2   15197
Cards
Entrez_Gene (NCBI)OR51F2  119694  olfactory receptor family 51 subfamily F member 2
AliasesOR11-23
GeneCards (Weizmann)OR51F2
Ensembl hg19 (Hinxton)ENSG00000176925 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000176925 [Gene_View]  chr11:4821386-4822414 [Contig_View]  OR51F2 [Vega]
ICGC DataPortalENSG00000176925
TCGA cBioPortalOR51F2
AceView (NCBI)OR51F2
Genatlas (Paris)OR51F2
WikiGenes119694
SOURCE (Princeton)OR51F2
Genetics Home Reference (NIH)OR51F2
Genomic and cartography
GoldenPath hg38 (UCSC)OR51F2  -     chr11:4821386-4822414 +  11p15.4   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR51F2  -     11p15.4   [Description]    (hg19-Feb_2009)
EnsemblOR51F2 - 11p15.4 [CytoView hg19]  OR51F2 - 11p15.4 [CytoView hg38]
Mapping of homologs : NCBIOR51F2 [Mapview hg19]  OR51F2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC136877
RefSeq transcript (Entrez)NM_001004753
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR51F2
Cluster EST : UnigeneHs.553562 [ NCBI ]
CGAP (NCI)Hs.553562
Alternative Splicing GalleryENSG00000176925
Gene ExpressionOR51F2 [ NCBI-GEO ]   OR51F2 [ EBI - ARRAY_EXPRESS ]   OR51F2 [ SEEK ]   OR51F2 [ MEM ]
Gene Expression Viewer (FireBrowse)OR51F2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)119694
GTEX Portal (Tissue expression)OR51F2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NH61   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NH61  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NH61
Splice isoforms : SwissVarQ8NH61
PhosPhoSitePlusQ8NH61
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR51F2
DMDM Disease mutations119694
Blocks (Seattle)OR51F2
SuperfamilyQ8NH61
Human Protein AtlasENSG00000176925
Peptide AtlasQ8NH61
HPRD17738
IPIIPI00303684   
Protein Interaction databases
DIP (DOE-UCLA)Q8NH61
IntAct (EBI)Q8NH61
FunCoupENSG00000176925
BioGRIDOR51F2
STRING (EMBL)OR51F2
ZODIACOR51F2
Ontologies - Pathways
QuickGOQ8NH61
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  plasma membrane  signal transduction  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  plasma membrane  signal transduction  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR51F2
Atlas of Cancer Signalling NetworkOR51F2
Wikipedia pathwaysOR51F2
Orthology - Evolution
OrthoDB119694
GeneTree (enSembl)ENSG00000176925
Phylogenetic Trees/Animal Genes : TreeFamOR51F2
HOVERGENQ8NH61
HOGENOMQ8NH61
Homologs : HomoloGeneOR51F2
Homology/Alignments : Family Browser (UCSC)OR51F2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR51F2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR51F2
dbVarOR51F2
ClinVarOR51F2
1000_GenomesOR51F2 
Exome Variant ServerOR51F2
ExAC (Exome Aggregation Consortium)OR51F2 (select the gene name)
Genetic variants : HAPMAP119694
Genomic Variants (DGV)OR51F2 [DGVbeta]
DECIPHEROR51F2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR51F2 
Mutations
ICGC Data PortalOR51F2 
TCGA Data PortalOR51F2 
Broad Tumor PortalOR51F2
OASIS PortalOR51F2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR51F2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR51F2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR51F2
DgiDB (Drug Gene Interaction Database)OR51F2
DoCM (Curated mutations)OR51F2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR51F2 (select a term)
intoGenOR51F2
Cancer3DOR51F2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR51F2
Genetic Testing Registry OR51F2
NextProtQ8NH61 [Medical]
TSGene119694
GENETestsOR51F2
Target ValidationOR51F2
Huge Navigator OR51F2 [HugePedia]
snp3D : Map Gene to Disease119694
BioCentury BCIQOR51F2
ClinGenOR51F2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD119694
Chemical/Pharm GKB GenePA32375
Clinical trialOR51F2
Miscellaneous
canSAR (ICR)OR51F2 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR51F2
EVEXOR51F2
GoPubMedOR51F2
iHOPOR51F2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:34:29 CEST 2017

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