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OR51H1 (olfactory receptor family 51 subfamily H member 1)

Identity

Alias_namesOR51H1P
olfactory receptor, family 51, subfamily H, member 1 pseudogene
olfactory receptor, family 51, subfamily H, member 1
Other alias
HGNC (Hugo) OR51H1
LocusID (NCBI) 401663
Atlas_Id 80214
Location 11p15.4  [Link to chromosome band 11p15]
Location_base_pair Starts at 4859519 and ends at 4860663 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR51H1   14833
Cards
Entrez_Gene (NCBI)OR51H1  401663  olfactory receptor family 51 subfamily H member 1
AliasesOR51H1P
GeneCards (Weizmann)OR51H1
Ensembl hg19 (Hinxton)ENSG00000176904 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000176904 [Gene_View]  chr11:4859519-4860663 [Contig_View]  OR51H1 [Vega]
ICGC DataPortalENSG00000176904
TCGA cBioPortalOR51H1
AceView (NCBI)OR51H1
Genatlas (Paris)OR51H1
WikiGenes401663
SOURCE (Princeton)OR51H1
Genetics Home Reference (NIH)OR51H1
Genomic and cartography
GoldenPath hg38 (UCSC)OR51H1  -     chr11:4859519-4860663 -  11p15.4   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR51H1  -     11p15.4   [Description]    (hg19-Feb_2009)
EnsemblOR51H1 - 11p15.4 [CytoView hg19]  OR51H1 - 11p15.4 [CytoView hg38]
Mapping of homologs : NCBIOR51H1 [Mapview hg19]  OR51H1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001348291
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR51H1
Alternative Splicing GalleryENSG00000176904
Gene ExpressionOR51H1 [ NCBI-GEO ]   OR51H1 [ EBI - ARRAY_EXPRESS ]   OR51H1 [ SEEK ]   OR51H1 [ MEM ]
Gene Expression Viewer (FireBrowse)OR51H1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)401663
GTEX Portal (Tissue expression)OR51H1
Human Protein AtlasENSG00000176904-OR51H1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NH63   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NH63  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NH63
Splice isoforms : SwissVarQ8NH63
PhosPhoSitePlusQ8NH63
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR51H1
DMDM Disease mutations401663
Blocks (Seattle)OR51H1
SuperfamilyQ8NH63
Human Protein Atlas [tissue]ENSG00000176904-OR51H1 [tissue]
Peptide AtlasQ8NH63
IPIIPI00402212   
Protein Interaction databases
DIP (DOE-UCLA)Q8NH63
IntAct (EBI)Q8NH63
FunCoupENSG00000176904
BioGRIDOR51H1
STRING (EMBL)OR51H1
ZODIACOR51H1
Ontologies - Pathways
QuickGOQ8NH63
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  plasma membrane  signal transduction  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  plasma membrane  signal transduction  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
NDEx NetworkOR51H1
Atlas of Cancer Signalling NetworkOR51H1
Wikipedia pathwaysOR51H1
Orthology - Evolution
OrthoDB401663
GeneTree (enSembl)ENSG00000176904
Phylogenetic Trees/Animal Genes : TreeFamOR51H1
HOVERGENQ8NH63
HOGENOMQ8NH63
Homologs : HomoloGeneOR51H1
Homology/Alignments : Family Browser (UCSC)OR51H1
Gene fusions - Rearrangements
Tumor Fusion PortalOR51H1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR51H1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR51H1
dbVarOR51H1
ClinVarOR51H1
1000_GenomesOR51H1 
Exome Variant ServerOR51H1
ExAC (Exome Aggregation Consortium)ENSG00000176904
GNOMAD BrowserENSG00000176904
Genetic variants : HAPMAP401663
Genomic Variants (DGV)OR51H1 [DGVbeta]
DECIPHEROR51H1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR51H1 
Mutations
ICGC Data PortalOR51H1 
TCGA Data PortalOR51H1 
Broad Tumor PortalOR51H1
OASIS PortalOR51H1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDOR51H1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR51H1
DgiDB (Drug Gene Interaction Database)OR51H1
DoCM (Curated mutations)OR51H1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR51H1 (select a term)
intoGenOR51H1
Cancer3DOR51H1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETOR51H1
MedgenOR51H1
Genetic Testing Registry OR51H1
NextProtQ8NH63 [Medical]
TSGene401663
GENETestsOR51H1
Target ValidationOR51H1
Huge Navigator OR51H1 [HugePedia]
snp3D : Map Gene to Disease401663
BioCentury BCIQOR51H1
ClinGenOR51H1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD401663
Chemical/Pharm GKB GenePA32378
Clinical trialOR51H1
Miscellaneous
canSAR (ICR)OR51H1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR51H1
EVEXOR51H1
GoPubMedOR51H1
iHOPOR51H1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:24:32 CET 2017

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