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OR51I2 (olfactory receptor family 51 subfamily I member 2)

Identity

Alias_namesolfactory receptor, family 51, subfamily I, member 2
Other aliasOR11-38
HGNC (Hugo) OR51I2
LocusID (NCBI) 390064
Atlas_Id 71367
Location 11p15.4  [Link to chromosome band 11p15]
Location_base_pair Starts at 5453408 and ends at 5454477 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR51I2   15201
Cards
Entrez_Gene (NCBI)OR51I2  390064  olfactory receptor family 51 subfamily I member 2
AliasesOR11-38
GeneCards (Weizmann)OR51I2
Ensembl hg19 (Hinxton)ENSG00000187918 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000187918 [Gene_View]  chr11:5453408-5454477 [Contig_View]  OR51I2 [Vega]
ICGC DataPortalENSG00000187918
TCGA cBioPortalOR51I2
AceView (NCBI)OR51I2
Genatlas (Paris)OR51I2
WikiGenes390064
SOURCE (Princeton)OR51I2
Genetics Home Reference (NIH)OR51I2
Genomic and cartography
GoldenPath hg38 (UCSC)OR51I2  -     chr11:5453408-5454477 +  11p15.4   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR51I2  -     11p15.4   [Description]    (hg19-Feb_2009)
EnsemblOR51I2 - 11p15.4 [CytoView hg19]  OR51I2 - 11p15.4 [CytoView hg38]
Mapping of homologs : NCBIOR51I2 [Mapview hg19]  OR51I2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC140730
RefSeq transcript (Entrez)NM_001004754
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR51I2
Cluster EST : UnigeneHs.553733 [ NCBI ]
CGAP (NCI)Hs.553733
Alternative Splicing GalleryENSG00000187918
Gene ExpressionOR51I2 [ NCBI-GEO ]   OR51I2 [ EBI - ARRAY_EXPRESS ]   OR51I2 [ SEEK ]   OR51I2 [ MEM ]
Gene Expression Viewer (FireBrowse)OR51I2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)390064
GTEX Portal (Tissue expression)OR51I2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H344   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H344  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H344
Splice isoforms : SwissVarQ9H344
PhosPhoSitePlusQ9H344
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Domain families : Smart (EMBL)7TM_GPCR_Srsx (SM01381)  
Conserved Domain (NCBI)OR51I2
DMDM Disease mutations390064
Blocks (Seattle)OR51I2
SuperfamilyQ9H344
Human Protein AtlasENSG00000187918
Peptide AtlasQ9H344
HPRD15000
IPIIPI00023125   
Protein Interaction databases
DIP (DOE-UCLA)Q9H344
IntAct (EBI)Q9H344
FunCoupENSG00000187918
BioGRIDOR51I2
STRING (EMBL)OR51I2
ZODIACOR51I2
Ontologies - Pathways
QuickGOQ9H344
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  olfactory receptor activity  plasma membrane  plasma membrane  signal transduction  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  olfactory receptor activity  plasma membrane  plasma membrane  signal transduction  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR51I2
Atlas of Cancer Signalling NetworkOR51I2
Wikipedia pathwaysOR51I2
Orthology - Evolution
OrthoDB390064
GeneTree (enSembl)ENSG00000187918
Phylogenetic Trees/Animal Genes : TreeFamOR51I2
HOVERGENQ9H344
HOGENOMQ9H344
Homologs : HomoloGeneOR51I2
Homology/Alignments : Family Browser (UCSC)OR51I2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR51I2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR51I2
dbVarOR51I2
ClinVarOR51I2
1000_GenomesOR51I2 
Exome Variant ServerOR51I2
ExAC (Exome Aggregation Consortium)OR51I2 (select the gene name)
Genetic variants : HAPMAP390064
Genomic Variants (DGV)OR51I2 [DGVbeta]
DECIPHEROR51I2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR51I2 
Mutations
ICGC Data PortalOR51I2 
TCGA Data PortalOR51I2 
Broad Tumor PortalOR51I2
OASIS PortalOR51I2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR51I2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR51I2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR51I2
DgiDB (Drug Gene Interaction Database)OR51I2
DoCM (Curated mutations)OR51I2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR51I2 (select a term)
intoGenOR51I2
Cancer3DOR51I2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR51I2
Genetic Testing Registry OR51I2
NextProtQ9H344 [Medical]
TSGene390064
GENETestsOR51I2
Huge Navigator OR51I2 [HugePedia]
snp3D : Map Gene to Disease390064
BioCentury BCIQOR51I2
ClinGenOR51I2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD390064
Chemical/Pharm GKB GenePA32381
Clinical trialOR51I2
Miscellaneous
canSAR (ICR)OR51I2 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR51I2
EVEXOR51I2
GoPubMedOR51I2
iHOPOR51I2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 11:46:45 CEST 2017

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