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OR51J1 (olfactory receptor family 51 subfamily J member 1 (gene/pseudogene))

Identity

Alias_namesOR51J2
OR51J1P
olfactory receptor, family 51, subfamily J, member 1
olfactory receptor, family 51, subfamily J, member 1 (gene/pseudogene)
Other alias
HGNC (Hugo) OR51J1
LocusID (NCBI) 79470
Atlas_Id 79618
Location 11p15.4  [Link to chromosome band 11p15]
Location_base_pair Starts at 5402397 and ends at 5403771 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)OR51J1   14856
Cards
Entrez_Gene (NCBI)OR51J1  79470  olfactory receptor family 51 subfamily J member 1 (gene/pseudogene)
AliasesOR51J1P; OR51J2
GeneCards (Weizmann)OR51J1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr11:5402397-5403771 [Contig_View]  OR51J1 [Vega]
TCGA cBioPortalOR51J1
AceView (NCBI)OR51J1
Genatlas (Paris)OR51J1
WikiGenes79470
SOURCE (Princeton)OR51J1
Genetics Home Reference (NIH)OR51J1
Genomic and cartography
GoldenPath hg38 (UCSC)OR51J1  -     chr11:5402397-5403771 +  11p15.4   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR51J1  -     11p15.4   [Description]    (hg19-Feb_2009)
GoldenPathOR51J1 - 11p15.4 [CytoView hg19]  OR51J1 - 11p15.4 [CytoView hg38]
Mapping of homologs : NCBIOR51J1 [Mapview hg19]  OR51J1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB529238
RefSeq transcript (Entrez)NM_001348224
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR51J1
Gene ExpressionOR51J1 [ NCBI-GEO ]   OR51J1 [ EBI - ARRAY_EXPRESS ]   OR51J1 [ SEEK ]   OR51J1 [ MEM ]
Gene Expression Viewer (FireBrowse)OR51J1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79470
GTEX Portal (Tissue expression)OR51J1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H342   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H342  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H342
Splice isoforms : SwissVarQ9H342
PhosPhoSitePlusQ9H342
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR51J1
DMDM Disease mutations79470
Blocks (Seattle)OR51J1
SuperfamilyQ9H342
Peptide AtlasQ9H342
IPIIPI00023121   
Protein Interaction databases
DIP (DOE-UCLA)Q9H342
IntAct (EBI)Q9H342
BioGRIDOR51J1
STRING (EMBL)OR51J1
ZODIACOR51J1
Ontologies - Pathways
QuickGOQ9H342
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  olfactory receptor activity  plasma membrane  plasma membrane  signal transduction  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  olfactory receptor activity  plasma membrane  plasma membrane  signal transduction  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
NDEx NetworkOR51J1
Atlas of Cancer Signalling NetworkOR51J1
Wikipedia pathwaysOR51J1
Orthology - Evolution
OrthoDB79470
Phylogenetic Trees/Animal Genes : TreeFamOR51J1
HOGENOMQ9H342
Homologs : HomoloGeneOR51J1
Homology/Alignments : Family Browser (UCSC)OR51J1
Gene fusions - Rearrangements
Fusion : QuiverOR51J1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR51J1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR51J1
dbVarOR51J1
ClinVarOR51J1
1000_GenomesOR51J1 
Exome Variant ServerOR51J1
Varsome BrowserOR51J1
Genetic variants : HAPMAP79470
Genomic Variants (DGV)OR51J1 [DGVbeta]
DECIPHEROR51J1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR51J1 
Mutations
ICGC Data PortalOR51J1 
TCGA Data PortalOR51J1 
Broad Tumor PortalOR51J1
OASIS PortalOR51J1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR51J1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR51J1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR51J1
DgiDB (Drug Gene Interaction Database)OR51J1
DoCM (Curated mutations)OR51J1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR51J1 (select a term)
intoGenOR51J1
Cancer3DOR51J1(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETOR51J1
MedgenOR51J1
Genetic Testing Registry OR51J1
NextProtQ9H342 [Medical]
TSGene79470
GENETestsOR51J1
Target ValidationOR51J1
Huge Navigator OR51J1 [HugePedia]
snp3D : Map Gene to Disease79470
BioCentury BCIQOR51J1
ClinGenOR51J1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79470
Chemical/Pharm GKB GenePA32382
Clinical trialOR51J1
Miscellaneous
canSAR (ICR)OR51J1 (select the gene name)
DataMed IndexOR51J1
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR51J1
EVEXOR51J1
GoPubMedOR51J1
iHOPOR51J1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri Jun 7 17:41:42 CEST 2019
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