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OR51L1 (olfactory receptor, family 51, subfamily L, member 1)

Identity

Alias_namesolfactory receptor, family 51, subfamily L, member 1
Other aliasOR11-31
HGNC (Hugo) OR51L1
LocusID (NCBI) 119682
Atlas_Id 71368
Location 11p15.4  [Link to chromosome band 11p15]
Location_base_pair Starts at 5020213 and ends at 5021160 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR51L1   14759
Cards
Entrez_Gene (NCBI)OR51L1  119682  olfactory receptor, family 51, subfamily L, member 1
AliasesOR11-31
GeneCards (Weizmann)OR51L1
Ensembl hg19 (Hinxton)ENSG00000176798 [Gene_View]  chr11:5020213-5021160 [Contig_View]  OR51L1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000176798 [Gene_View]  chr11:5020213-5021160 [Contig_View]  OR51L1 [Vega]
ICGC DataPortalENSG00000176798
TCGA cBioPortalOR51L1
AceView (NCBI)OR51L1
Genatlas (Paris)OR51L1
WikiGenes119682
SOURCE (Princeton)OR51L1
Genetics Home Reference (NIH)OR51L1
Genomic and cartography
GoldenPath hg19 (UCSC)OR51L1  -     chr11:5020213-5021160 +  11p15.4   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)OR51L1  -     11p15.4   [Description]    (hg38-Dec_2013)
EnsemblOR51L1 - 11p15.4 [CytoView hg19]  OR51L1 - 11p15.4 [CytoView hg38]
Mapping of homologs : NCBIOR51L1 [Mapview hg19]  OR51L1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC141571 BC146584
RefSeq transcript (Entrez)NM_001004755
RefSeq genomic (Entrez)NC_000011 NC_018922 NT_009237 NW_004929378
Consensus coding sequences : CCDS (NCBI)OR51L1
Cluster EST : UnigeneHs.553559 [ NCBI ]
CGAP (NCI)Hs.553559
Alternative Splicing GalleryENSG00000176798
Gene ExpressionOR51L1 [ NCBI-GEO ]   OR51L1 [ EBI - ARRAY_EXPRESS ]   OR51L1 [ SEEK ]   OR51L1 [ MEM ]
Gene Expression Viewer (FireBrowse)OR51L1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)119682
GTEX Portal (Tissue expression)OR51L1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGJ5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGJ5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGJ5
Splice isoforms : SwissVarQ8NGJ5
PhosPhoSitePlusQ8NGJ5
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR51L1
DMDM Disease mutations119682
Blocks (Seattle)OR51L1
SuperfamilyQ8NGJ5
Human Protein AtlasENSG00000176798
Peptide AtlasQ8NGJ5
HPRD11810
IPIIPI00169037   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGJ5
IntAct (EBI)Q8NGJ5
FunCoupENSG00000176798
BioGRIDOR51L1
STRING (EMBL)OR51L1
ZODIACOR51L1
Ontologies - Pathways
QuickGOQ8NGJ5
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR51L1
Atlas of Cancer Signalling NetworkOR51L1
Wikipedia pathwaysOR51L1
Orthology - Evolution
OrthoDB119682
GeneTree (enSembl)ENSG00000176798
Phylogenetic Trees/Animal Genes : TreeFamOR51L1
HOVERGENQ8NGJ5
HOGENOMQ8NGJ5
Homologs : HomoloGeneOR51L1
Homology/Alignments : Family Browser (UCSC)OR51L1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR51L1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR51L1
dbVarOR51L1
ClinVarOR51L1
1000_GenomesOR51L1 
Exome Variant ServerOR51L1
ExAC (Exome Aggregation Consortium)OR51L1 (select the gene name)
Genetic variants : HAPMAP119682
Genomic Variants (DGV)OR51L1 [DGVbeta]
DECIPHER (Syndromes)11:5020213-5021160  ENSG00000176798
CONAN: Copy Number AnalysisOR51L1 
Mutations
ICGC Data PortalOR51L1 
TCGA Data PortalOR51L1 
Broad Tumor PortalOR51L1
OASIS PortalOR51L1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR51L1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR51L1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR51L1
DgiDB (Drug Gene Interaction Database)OR51L1
DoCM (Curated mutations)OR51L1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR51L1 (select a term)
intoGenOR51L1
Cancer3DOR51L1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR51L1
Genetic Testing Registry OR51L1
NextProtQ8NGJ5 [Medical]
TSGene119682
GENETestsOR51L1
Huge Navigator OR51L1 [HugePedia]
snp3D : Map Gene to Disease119682
BioCentury BCIQOR51L1
ClinGenOR51L1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD119682
Chemical/Pharm GKB GenePA32384
Clinical trialOR51L1
Miscellaneous
canSAR (ICR)OR51L1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR51L1
EVEXOR51L1
GoPubMedOR51L1
iHOPOR51L1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:36:46 CET 2017

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