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OR51S1 (olfactory receptor family 51 subfamily S member 1)

Identity

Alias_namesolfactory receptor, family 51, subfamily S, member 1
Other aliasOR11-24
HGNC (Hugo) OR51S1
LocusID (NCBI) 119692
Atlas_Id 71371
Location 11p15.4  [Link to chromosome band 11p15]
Location_base_pair Starts at 4848237 and ends at 4849208 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR51S1   15204
Cards
Entrez_Gene (NCBI)OR51S1  119692  olfactory receptor family 51 subfamily S member 1
AliasesOR11-24
GeneCards (Weizmann)OR51S1
Ensembl hg19 (Hinxton)ENSG00000176922 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000176922 [Gene_View]  chr11:4848237-4849208 [Contig_View]  OR51S1 [Vega]
ICGC DataPortalENSG00000176922
TCGA cBioPortalOR51S1
AceView (NCBI)OR51S1
Genatlas (Paris)OR51S1
WikiGenes119692
SOURCE (Princeton)OR51S1
Genetics Home Reference (NIH)OR51S1
Genomic and cartography
GoldenPath hg38 (UCSC)OR51S1  -     chr11:4848237-4849208 -  11p15.4   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR51S1  -     11p15.4   [Description]    (hg19-Feb_2009)
EnsemblOR51S1 - 11p15.4 [CytoView hg19]  OR51S1 - 11p15.4 [CytoView hg38]
Mapping of homologs : NCBIOR51S1 [Mapview hg19]  OR51S1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC136932 BC136934
RefSeq transcript (Entrez)NM_001004758
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR51S1
Cluster EST : UnigeneHs.553561 [ NCBI ]
CGAP (NCI)Hs.553561
Alternative Splicing GalleryENSG00000176922
Gene ExpressionOR51S1 [ NCBI-GEO ]   OR51S1 [ EBI - ARRAY_EXPRESS ]   OR51S1 [ SEEK ]   OR51S1 [ MEM ]
Gene Expression Viewer (FireBrowse)OR51S1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)119692
GTEX Portal (Tissue expression)OR51S1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGJ8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGJ8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGJ8
Splice isoforms : SwissVarQ8NGJ8
PhosPhoSitePlusQ8NGJ8
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR51S1
DMDM Disease mutations119692
Blocks (Seattle)OR51S1
SuperfamilyQ8NGJ8
Human Protein AtlasENSG00000176922
Peptide AtlasQ8NGJ8
HPRD17739
IPIIPI00169040   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGJ8
IntAct (EBI)Q8NGJ8
FunCoupENSG00000176922
BioGRIDOR51S1
STRING (EMBL)OR51S1
ZODIACOR51S1
Ontologies - Pathways
QuickGOQ8NGJ8
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  plasma membrane  signal transduction  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  plasma membrane  signal transduction  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR51S1
Atlas of Cancer Signalling NetworkOR51S1
Wikipedia pathwaysOR51S1
Orthology - Evolution
OrthoDB119692
GeneTree (enSembl)ENSG00000176922
Phylogenetic Trees/Animal Genes : TreeFamOR51S1
HOVERGENQ8NGJ8
HOGENOMQ8NGJ8
Homologs : HomoloGeneOR51S1
Homology/Alignments : Family Browser (UCSC)OR51S1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR51S1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR51S1
dbVarOR51S1
ClinVarOR51S1
1000_GenomesOR51S1 
Exome Variant ServerOR51S1
ExAC (Exome Aggregation Consortium)OR51S1 (select the gene name)
Genetic variants : HAPMAP119692
Genomic Variants (DGV)OR51S1 [DGVbeta]
DECIPHEROR51S1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR51S1 
Mutations
ICGC Data PortalOR51S1 
TCGA Data PortalOR51S1 
Broad Tumor PortalOR51S1
OASIS PortalOR51S1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR51S1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR51S1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR51S1
DgiDB (Drug Gene Interaction Database)OR51S1
DoCM (Curated mutations)OR51S1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR51S1 (select a term)
intoGenOR51S1
Cancer3DOR51S1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR51S1
Genetic Testing Registry OR51S1
NextProtQ8NGJ8 [Medical]
TSGene119692
GENETestsOR51S1
Target ValidationOR51S1
Huge Navigator OR51S1 [HugePedia]
snp3D : Map Gene to Disease119692
BioCentury BCIQOR51S1
ClinGenOR51S1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD119692
Chemical/Pharm GKB GenePA32390
Clinical trialOR51S1
Miscellaneous
canSAR (ICR)OR51S1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR51S1
EVEXOR51S1
GoPubMedOR51S1
iHOPOR51S1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:33:16 CEST 2017

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