Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

OR51V1 (olfactory receptor family 51 subfamily V member 1)

Identity

Alias_namesOR51A12
olfactory receptor, family 51, subfamily V, member 1
Other aliasOR11-36
HGNC (Hugo) OR51V1
LocusID (NCBI) 283111
Atlas_Id 71373
Location 11p15.4  [Link to chromosome band 11p15]
Location_base_pair Starts at 5199735 and ends at 5200700 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR51V1   19597
Cards
Entrez_Gene (NCBI)OR51V1  283111  olfactory receptor family 51 subfamily V member 1
AliasesOR11-36; OR51A12
GeneCards (Weizmann)OR51V1
Ensembl hg19 (Hinxton)ENSG00000176742 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000176742 [Gene_View]  chr11:5199735-5200700 [Contig_View]  OR51V1 [Vega]
ICGC DataPortalENSG00000176742
TCGA cBioPortalOR51V1
AceView (NCBI)OR51V1
Genatlas (Paris)OR51V1
WikiGenes283111
SOURCE (Princeton)OR51V1
Genetics Home Reference (NIH)OR51V1
Genomic and cartography
GoldenPath hg38 (UCSC)OR51V1  -     chr11:5199735-5200700 -  11p15.4   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR51V1  -     11p15.4   [Description]    (hg19-Feb_2009)
EnsemblOR51V1 - 11p15.4 [CytoView hg19]  OR51V1 - 11p15.4 [CytoView hg38]
Mapping of homologs : NCBIOR51V1 [Mapview hg19]  OR51V1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC156854
RefSeq transcript (Entrez)NM_001004760
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR51V1
Cluster EST : UnigeneHs.553670 [ NCBI ]
CGAP (NCI)Hs.553670
Alternative Splicing GalleryENSG00000176742
Gene ExpressionOR51V1 [ NCBI-GEO ]   OR51V1 [ EBI - ARRAY_EXPRESS ]   OR51V1 [ SEEK ]   OR51V1 [ MEM ]
Gene Expression Viewer (FireBrowse)OR51V1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)283111
GTEX Portal (Tissue expression)OR51V1
Human Protein AtlasENSG00000176742-OR51V1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H2C8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H2C8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H2C8
Splice isoforms : SwissVarQ9H2C8
PhosPhoSitePlusQ9H2C8
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR51V1
DMDM Disease mutations283111
Blocks (Seattle)OR51V1
SuperfamilyQ9H2C8
Human Protein Atlas [tissue]ENSG00000176742-OR51V1 [tissue]
Peptide AtlasQ9H2C8
HPRD17741
IPIIPI00300877   
Protein Interaction databases
DIP (DOE-UCLA)Q9H2C8
IntAct (EBI)Q9H2C8
FunCoupENSG00000176742
BioGRIDOR51V1
STRING (EMBL)OR51V1
ZODIACOR51V1
Ontologies - Pathways
QuickGOQ9H2C8
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  olfactory receptor activity  plasma membrane  plasma membrane  signal transduction  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  olfactory receptor activity  plasma membrane  plasma membrane  signal transduction  G-protein coupled receptor signaling pathway  sensory perception of smell  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR51V1
Atlas of Cancer Signalling NetworkOR51V1
Wikipedia pathwaysOR51V1
Orthology - Evolution
OrthoDB283111
GeneTree (enSembl)ENSG00000176742
Phylogenetic Trees/Animal Genes : TreeFamOR51V1
HOVERGENQ9H2C8
HOGENOMQ9H2C8
Homologs : HomoloGeneOR51V1
Homology/Alignments : Family Browser (UCSC)OR51V1
Gene fusions - Rearrangements
Tumor Fusion PortalOR51V1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR51V1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR51V1
dbVarOR51V1
ClinVarOR51V1
1000_GenomesOR51V1 
Exome Variant ServerOR51V1
ExAC (Exome Aggregation Consortium)ENSG00000176742
GNOMAD BrowserENSG00000176742
Genetic variants : HAPMAP283111
Genomic Variants (DGV)OR51V1 [DGVbeta]
DECIPHEROR51V1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR51V1 
Mutations
ICGC Data PortalOR51V1 
TCGA Data PortalOR51V1 
Broad Tumor PortalOR51V1
OASIS PortalOR51V1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR51V1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR51V1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR51V1
DgiDB (Drug Gene Interaction Database)OR51V1
DoCM (Curated mutations)OR51V1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR51V1 (select a term)
intoGenOR51V1
Cancer3DOR51V1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETOR51V1
MedgenOR51V1
Genetic Testing Registry OR51V1
NextProtQ9H2C8 [Medical]
TSGene283111
GENETestsOR51V1
Target ValidationOR51V1
Huge Navigator OR51V1 [HugePedia]
snp3D : Map Gene to Disease283111
BioCentury BCIQOR51V1
ClinGenOR51V1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD283111
Chemical/Pharm GKB GenePA134873075
Clinical trialOR51V1
Miscellaneous
canSAR (ICR)OR51V1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR51V1
EVEXOR51V1
GoPubMedOR51V1
iHOPOR51V1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:24:33 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.