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OR52N2 (olfactory receptor family 52 subfamily N member 2)

Identity

Alias_namesolfactory receptor, family 52, subfamily N, member 2
Other aliasOR11-57
HGNC (Hugo) OR52N2
LocusID (NCBI) 390077
Atlas_Id 71394
Location 11p15.4  [Link to chromosome band 11p15]
Location_base_pair Starts at 5820336 and ends at 5821301 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR52N2   15228
Cards
Entrez_Gene (NCBI)OR52N2  390077  olfactory receptor family 52 subfamily N member 2
AliasesOR11-57
GeneCards (Weizmann)OR52N2
Ensembl hg19 (Hinxton)ENSG00000180988 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000180988 [Gene_View]  chr11:5820336-5821301 [Contig_View]  OR52N2 [Vega]
ICGC DataPortalENSG00000180988
TCGA cBioPortalOR52N2
AceView (NCBI)OR52N2
Genatlas (Paris)OR52N2
WikiGenes390077
SOURCE (Princeton)OR52N2
Genetics Home Reference (NIH)OR52N2
Genomic and cartography
GoldenPath hg38 (UCSC)OR52N2  -     chr11:5820336-5821301 +  11p15.4   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR52N2  -     11p15.4   [Description]    (hg19-Feb_2009)
EnsemblOR52N2 - 11p15.4 [CytoView hg19]  OR52N2 - 11p15.4 [CytoView hg38]
Mapping of homologs : NCBIOR52N2 [Mapview hg19]  OR52N2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC140732
RefSeq transcript (Entrez)NM_001005174
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR52N2
Cluster EST : UnigeneHs.553737 [ NCBI ]
CGAP (NCI)Hs.553737
Alternative Splicing GalleryENSG00000180988
Gene ExpressionOR52N2 [ NCBI-GEO ]   OR52N2 [ EBI - ARRAY_EXPRESS ]   OR52N2 [ SEEK ]   OR52N2 [ MEM ]
Gene Expression Viewer (FireBrowse)OR52N2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)390077
GTEX Portal (Tissue expression)OR52N2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGI0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGI0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGI0
Splice isoforms : SwissVarQ8NGI0
PhosPhoSitePlusQ8NGI0
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR52N2
DMDM Disease mutations390077
Blocks (Seattle)OR52N2
SuperfamilyQ8NGI0
Human Protein AtlasENSG00000180988
Peptide AtlasQ8NGI0
HPRD17745
IPIIPI00176467   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGI0
IntAct (EBI)Q8NGI0
FunCoupENSG00000180988
BioGRIDOR52N2
STRING (EMBL)OR52N2
ZODIACOR52N2
Ontologies - Pathways
QuickGOQ8NGI0
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  plasma membrane  signal transduction  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  plasma membrane  plasma membrane  signal transduction  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR52N2
Atlas of Cancer Signalling NetworkOR52N2
Wikipedia pathwaysOR52N2
Orthology - Evolution
OrthoDB390077
GeneTree (enSembl)ENSG00000180988
Phylogenetic Trees/Animal Genes : TreeFamOR52N2
HOVERGENQ8NGI0
HOGENOMQ8NGI0
Homologs : HomoloGeneOR52N2
Homology/Alignments : Family Browser (UCSC)OR52N2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR52N2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR52N2
dbVarOR52N2
ClinVarOR52N2
1000_GenomesOR52N2 
Exome Variant ServerOR52N2
ExAC (Exome Aggregation Consortium)OR52N2 (select the gene name)
Genetic variants : HAPMAP390077
Genomic Variants (DGV)OR52N2 [DGVbeta]
DECIPHEROR52N2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR52N2 
Mutations
ICGC Data PortalOR52N2 
TCGA Data PortalOR52N2 
Broad Tumor PortalOR52N2
OASIS PortalOR52N2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR52N2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR52N2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR52N2
DgiDB (Drug Gene Interaction Database)OR52N2
DoCM (Curated mutations)OR52N2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR52N2 (select a term)
intoGenOR52N2
Cancer3DOR52N2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR52N2
Genetic Testing Registry OR52N2
NextProtQ8NGI0 [Medical]
TSGene390077
GENETestsOR52N2
Target ValidationOR52N2
Huge Navigator OR52N2 [HugePedia]
snp3D : Map Gene to Disease390077
BioCentury BCIQOR52N2
ClinGenOR52N2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD390077
Chemical/Pharm GKB GenePA32426
Clinical trialOR52N2
Miscellaneous
canSAR (ICR)OR52N2 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR52N2
EVEXOR52N2
GoPubMedOR52N2
iHOPOR52N2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:34:36 CEST 2017

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