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OR5AN1 (olfactory receptor family 5 subfamily AN member 1)

Identity

Alias_namesolfactory receptor, family 5, subfamily AN, member 1
Other aliasOR11-244
HGNC (Hugo) OR5AN1
LocusID (NCBI) 390195
Atlas_Id 71410
Location 11q12.1  [Link to chromosome band 11q12]
Location_base_pair Starts at 59364459 and ends at 59365394 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR5AN1   15255
Cards
Entrez_Gene (NCBI)OR5AN1  390195  olfactory receptor family 5 subfamily AN member 1
AliasesOR11-244
GeneCards (Weizmann)OR5AN1
Ensembl hg19 (Hinxton)ENSG00000176495 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000176495 [Gene_View]  chr11:59364459-59365394 [Contig_View]  OR5AN1 [Vega]
ICGC DataPortalENSG00000176495
TCGA cBioPortalOR5AN1
AceView (NCBI)OR5AN1
Genatlas (Paris)OR5AN1
WikiGenes390195
SOURCE (Princeton)OR5AN1
Genetics Home Reference (NIH)OR5AN1
Genomic and cartography
GoldenPath hg38 (UCSC)OR5AN1  -     chr11:59364459-59365394 +  11q12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR5AN1  -     11q12.1   [Description]    (hg19-Feb_2009)
EnsemblOR5AN1 - 11q12.1 [CytoView hg19]  OR5AN1 - 11q12.1 [CytoView hg38]
Mapping of homologs : NCBIOR5AN1 [Mapview hg19]  OR5AN1 [Mapview hg38]
OMIM615702   
Gene and transcription
Genbank (Entrez)BC140917
RefSeq transcript (Entrez)NM_001004729
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR5AN1
Cluster EST : UnigeneHs.553755 [ NCBI ]
CGAP (NCI)Hs.553755
Alternative Splicing GalleryENSG00000176495
Gene ExpressionOR5AN1 [ NCBI-GEO ]   OR5AN1 [ EBI - ARRAY_EXPRESS ]   OR5AN1 [ SEEK ]   OR5AN1 [ MEM ]
Gene Expression Viewer (FireBrowse)OR5AN1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)390195
GTEX Portal (Tissue expression)OR5AN1
Human Protein AtlasENSG00000176495-OR5AN1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGI8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGI8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGI8
Splice isoforms : SwissVarQ8NGI8
PhosPhoSitePlusQ8NGI8
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR5AN1
DMDM Disease mutations390195
Blocks (Seattle)OR5AN1
SuperfamilyQ8NGI8
Human Protein Atlas [tissue]ENSG00000176495-OR5AN1 [tissue]
Peptide AtlasQ8NGI8
HPRD15032
IPIIPI00169030   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGI8
IntAct (EBI)Q8NGI8
FunCoupENSG00000176495
BioGRIDOR5AN1
STRING (EMBL)OR5AN1
ZODIACOR5AN1
Ontologies - Pathways
QuickGOQ8NGI8
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR5AN1
Atlas of Cancer Signalling NetworkOR5AN1
Wikipedia pathwaysOR5AN1
Orthology - Evolution
OrthoDB390195
GeneTree (enSembl)ENSG00000176495
Phylogenetic Trees/Animal Genes : TreeFamOR5AN1
HOVERGENQ8NGI8
HOGENOMQ8NGI8
Homologs : HomoloGeneOR5AN1
Homology/Alignments : Family Browser (UCSC)OR5AN1
Gene fusions - Rearrangements
Fusion: Tumor Portal OR5AN1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR5AN1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR5AN1
dbVarOR5AN1
ClinVarOR5AN1
1000_GenomesOR5AN1 
Exome Variant ServerOR5AN1
ExAC (Exome Aggregation Consortium)ENSG00000176495
GNOMAD BrowserENSG00000176495
Genetic variants : HAPMAP390195
Genomic Variants (DGV)OR5AN1 [DGVbeta]
DECIPHEROR5AN1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR5AN1 
Mutations
ICGC Data PortalOR5AN1 
TCGA Data PortalOR5AN1 
Broad Tumor PortalOR5AN1
OASIS PortalOR5AN1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR5AN1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR5AN1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR5AN1
DgiDB (Drug Gene Interaction Database)OR5AN1
DoCM (Curated mutations)OR5AN1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR5AN1 (select a term)
intoGenOR5AN1
Cancer3DOR5AN1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615702   
Orphanet
MedgenOR5AN1
Genetic Testing Registry OR5AN1
NextProtQ8NGI8 [Medical]
TSGene390195
GENETestsOR5AN1
Target ValidationOR5AN1
Huge Navigator OR5AN1 [HugePedia]
snp3D : Map Gene to Disease390195
BioCentury BCIQOR5AN1
ClinGenOR5AN1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD390195
Chemical/Pharm GKB GenePA32466
Clinical trialOR5AN1
Miscellaneous
canSAR (ICR)OR5AN1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR5AN1
EVEXOR5AN1
GoPubMedOR5AN1
iHOPOR5AN1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 12:20:54 CET 2017

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