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OR5AU1 (olfactory receptor family 5 subfamily AU member 1)

Identity

Alias_namesolfactory receptor, family 5, subfamily AU, member 1
Other aliasOR14-38
HGNC (Hugo) OR5AU1
LocusID (NCBI) 390445
Atlas_Id 71414
Location 14q11.2  [Link to chromosome band 14q11]
Location_base_pair Starts at 21154937 and ends at 21156025 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR5AU1   15362
Cards
Entrez_Gene (NCBI)OR5AU1  390445  olfactory receptor family 5 subfamily AU member 1
AliasesOR14-38
GeneCards (Weizmann)OR5AU1
Ensembl hg19 (Hinxton)ENSG00000169327 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000169327 [Gene_View]  chr14:21154937-21156025 [Contig_View]  OR5AU1 [Vega]
ICGC DataPortalENSG00000169327
TCGA cBioPortalOR5AU1
AceView (NCBI)OR5AU1
Genatlas (Paris)OR5AU1
WikiGenes390445
SOURCE (Princeton)OR5AU1
Genetics Home Reference (NIH)OR5AU1
Genomic and cartography
GoldenPath hg38 (UCSC)OR5AU1  -     chr14:21154937-21156025 -  14q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR5AU1  -     14q11.2   [Description]    (hg19-Feb_2009)
EnsemblOR5AU1 - 14q11.2 [CytoView hg19]  OR5AU1 - 14q11.2 [CytoView hg38]
Mapping of homologs : NCBIOR5AU1 [Mapview hg19]  OR5AU1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC137304 BC137305
RefSeq transcript (Entrez)NM_001004731
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR5AU1
Cluster EST : UnigeneHs.553768 [ NCBI ]
CGAP (NCI)Hs.553768
Alternative Splicing GalleryENSG00000169327
Gene ExpressionOR5AU1 [ NCBI-GEO ]   OR5AU1 [ EBI - ARRAY_EXPRESS ]   OR5AU1 [ SEEK ]   OR5AU1 [ MEM ]
Gene Expression Viewer (FireBrowse)OR5AU1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)390445
GTEX Portal (Tissue expression)OR5AU1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGC0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGC0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGC0
Splice isoforms : SwissVarQ8NGC0
PhosPhoSitePlusQ8NGC0
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR5AU1
DMDM Disease mutations390445
Blocks (Seattle)OR5AU1
SuperfamilyQ8NGC0
Human Protein AtlasENSG00000169327
Peptide AtlasQ8NGC0
HPRD15034
IPIIPI00168973   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGC0
IntAct (EBI)Q8NGC0
FunCoupENSG00000169327
BioGRIDOR5AU1
STRING (EMBL)OR5AU1
ZODIACOR5AU1
Ontologies - Pathways
QuickGOQ8NGC0
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR5AU1
Atlas of Cancer Signalling NetworkOR5AU1
Wikipedia pathwaysOR5AU1
Orthology - Evolution
OrthoDB390445
GeneTree (enSembl)ENSG00000169327
Phylogenetic Trees/Animal Genes : TreeFamOR5AU1
HOVERGENQ8NGC0
HOGENOMQ8NGC0
Homologs : HomoloGeneOR5AU1
Homology/Alignments : Family Browser (UCSC)OR5AU1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR5AU1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR5AU1
dbVarOR5AU1
ClinVarOR5AU1
1000_GenomesOR5AU1 
Exome Variant ServerOR5AU1
ExAC (Exome Aggregation Consortium)OR5AU1 (select the gene name)
Genetic variants : HAPMAP390445
Genomic Variants (DGV)OR5AU1 [DGVbeta]
DECIPHEROR5AU1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR5AU1 
Mutations
ICGC Data PortalOR5AU1 
TCGA Data PortalOR5AU1 
Broad Tumor PortalOR5AU1
OASIS PortalOR5AU1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR5AU1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR5AU1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR5AU1
DgiDB (Drug Gene Interaction Database)OR5AU1
DoCM (Curated mutations)OR5AU1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR5AU1 (select a term)
intoGenOR5AU1
Cancer3DOR5AU1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR5AU1
Genetic Testing Registry OR5AU1
NextProtQ8NGC0 [Medical]
TSGene390445
GENETestsOR5AU1
Target ValidationOR5AU1
Huge Navigator OR5AU1 [HugePedia]
snp3D : Map Gene to Disease390445
BioCentury BCIQOR5AU1
ClinGenOR5AU1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD390445
Chemical/Pharm GKB GenePA32474
Clinical trialOR5AU1
Miscellaneous
canSAR (ICR)OR5AU1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR5AU1
EVEXOR5AU1
GoPubMedOR5AU1
iHOPOR5AU1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:34:41 CEST 2017

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