Atlas of Genetics and Cytogenetics in Oncology and Haematology

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OR5H15 (olfactory receptor family 5 subfamily H member 15)

Identity

Alias_namesolfactory receptor, family 5, subfamily H, member 15
Other alias-
HGNC (Hugo) OR5H15
LocusID (NCBI) 403274
Atlas_Id 71429
Location 3q11.2  [Link to chromosome band 3q11]
Location_base_pair Starts at 98168700 and ends at 98169641 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)OR5H15   31287
Cards
Entrez_Gene (NCBI)OR5H15  403274  olfactory receptor family 5 subfamily H member 15
Aliases
GeneCards (Weizmann)OR5H15
Ensembl hg19 (Hinxton)ENSG00000233412 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000233412 [Gene_View]  ENSG00000233412 [Sequence]  chr3:98168700-98169641 [Contig_View]  OR5H15 [Vega]
ICGC DataPortalENSG00000233412
TCGA cBioPortalOR5H15
AceView (NCBI)OR5H15
Genatlas (Paris)OR5H15
WikiGenes403274
SOURCE (Princeton)OR5H15
Genetics Home Reference (NIH)OR5H15
Genomic and cartography
GoldenPath hg38 (UCSC)OR5H15  -     chr3:98168700-98169641 +  3q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR5H15  -     3q11.2   [Description]    (hg19-Feb_2009)
OR5H15 - 3q11.2 [CytoView hg19]  OR5H15 - 3q11.2 [CytoView hg38]
Mapping of homologs : NCBIOR5H15 [Mapview hg19]  OR5H15 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001005515
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR5H15
Cluster EST : UnigeneHs.554713 [ NCBI ]
CGAP (NCI)Hs.554713
Alternative Splicing GalleryENSG00000233412
Gene ExpressionOR5H15 [ NCBI-GEO ]   OR5H15 [ EBI - ARRAY_EXPRESS ]   OR5H15 [ SEEK ]   OR5H15 [ MEM ]
Gene Expression Viewer (FireBrowse)OR5H15 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)403274
GTEX Portal (Tissue expression)OR5H15
Human Protein AtlasENSG00000233412-OR5H15 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NDH6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NDH6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NDH6
Splice isoforms : SwissVarA6NDH6
PhosPhoSitePlusA6NDH6
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR5H15
DMDM Disease mutations403274
Blocks (Seattle)OR5H15
SuperfamilyA6NDH6
Human Protein Atlas [tissue]ENSG00000233412-OR5H15 [tissue]
Peptide AtlasA6NDH6
HPRD17760
IPIIPI00470611   IPI00941261   
Protein Interaction databases
DIP (DOE-UCLA)A6NDH6
IntAct (EBI)A6NDH6
FunCoupENSG00000233412
BioGRIDOR5H15
STRING (EMBL)OR5H15
ZODIACOR5H15
Ontologies - Pathways
QuickGOA6NDH6
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
NDEx NetworkOR5H15
Atlas of Cancer Signalling NetworkOR5H15
Wikipedia pathwaysOR5H15
Orthology - Evolution
OrthoDB403274
GeneTree (enSembl)ENSG00000233412
Phylogenetic Trees/Animal Genes : TreeFamOR5H15
HOGENOMA6NDH6
Homologs : HomoloGeneOR5H15
Homology/Alignments : Family Browser (UCSC)OR5H15
Gene fusions - Rearrangements
Fusion : QuiverOR5H15
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR5H15 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR5H15
dbVarOR5H15
ClinVarOR5H15
1000_GenomesOR5H15 
Exome Variant ServerOR5H15
ExAC (Exome Aggregation Consortium)ENSG00000233412
GNOMAD BrowserENSG00000233412
Varsome BrowserOR5H15
Genetic variants : HAPMAP403274
Genomic Variants (DGV)OR5H15 [DGVbeta]
DECIPHEROR5H15 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR5H15 
Mutations
ICGC Data PortalOR5H15 
TCGA Data PortalOR5H15 
Broad Tumor PortalOR5H15
OASIS PortalOR5H15 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR5H15  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR5H15
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR5H15
DgiDB (Drug Gene Interaction Database)OR5H15
DoCM (Curated mutations)OR5H15 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR5H15 (select a term)
intoGenOR5H15
Cancer3DOR5H15(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETOR5H15
MedgenOR5H15
Genetic Testing Registry OR5H15
NextProtA6NDH6 [Medical]
TSGene403274
GENETestsOR5H15
Target ValidationOR5H15
Huge Navigator OR5H15 [HugePedia]
snp3D : Map Gene to Disease403274
BioCentury BCIQOR5H15
ClinGenOR5H15
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD403274
Chemical/Pharm GKB GenePA134956122
Clinical trialOR5H15
Miscellaneous
canSAR (ICR)OR5H15 (select the gene name)
DataMed IndexOR5H15
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR5H15
EVEXOR5H15
GoPubMedOR5H15
iHOPOR5H15
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 21 15:16:11 CET 2019
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