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OR5I1 (olfactory receptor family 5 subfamily I member 1)

Identity

Alias_namesolfactory receptor, family 5, subfamily I, member 1
Alias_symbol (synonym)HSOlf1
OLF1
Other alias
HGNC (Hugo) OR5I1
LocusID (NCBI) 10798
Atlas_Id 71432
Location 11q12.1  [Link to chromosome band 11q12]
Location_base_pair Starts at 55935456 and ends at 55936400 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR5I1   8347
Cards
Entrez_Gene (NCBI)OR5I1  10798  olfactory receptor family 5 subfamily I member 1
AliasesHSOlf1; OLF1
GeneCards (Weizmann)OR5I1
Ensembl hg19 (Hinxton)ENSG00000167825 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000167825 [Gene_View]  chr11:55935456-55936400 [Contig_View]  OR5I1 [Vega]
ICGC DataPortalENSG00000167825
TCGA cBioPortalOR5I1
AceView (NCBI)OR5I1
Genatlas (Paris)OR5I1
WikiGenes10798
SOURCE (Princeton)OR5I1
Genetics Home Reference (NIH)OR5I1
Genomic and cartography
GoldenPath hg38 (UCSC)OR5I1  -     chr11:55935456-55936400 -  11q12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR5I1  -     11q12.1   [Description]    (hg19-Feb_2009)
EnsemblOR5I1 - 11q12.1 [CytoView hg19]  OR5I1 - 11q12.1 [CytoView hg38]
Mapping of homologs : NCBIOR5I1 [Mapview hg19]  OR5I1 [Mapview hg38]
OMIM608496   
Gene and transcription
Genbank (Entrez)BC069093
RefSeq transcript (Entrez)NM_006637
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR5I1
Cluster EST : UnigeneHs.533706 [ NCBI ]
CGAP (NCI)Hs.533706
Alternative Splicing GalleryENSG00000167825
Gene ExpressionOR5I1 [ NCBI-GEO ]   OR5I1 [ EBI - ARRAY_EXPRESS ]   OR5I1 [ SEEK ]   OR5I1 [ MEM ]
Gene Expression Viewer (FireBrowse)OR5I1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10798
GTEX Portal (Tissue expression)OR5I1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ13606   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ13606  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ13606
Splice isoforms : SwissVarQ13606
PhosPhoSitePlusQ13606
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR5I1
DMDM Disease mutations10798
Blocks (Seattle)OR5I1
SuperfamilyQ13606
Human Protein AtlasENSG00000167825
Peptide AtlasQ13606
HPRD09772
IPIIPI00014282   
Protein Interaction databases
DIP (DOE-UCLA)Q13606
IntAct (EBI)Q13606
FunCoupENSG00000167825
BioGRIDOR5I1
STRING (EMBL)OR5I1
ZODIACOR5I1
Ontologies - Pathways
QuickGOQ13606
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  signal transduction  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  signal transduction  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR5I1
Atlas of Cancer Signalling NetworkOR5I1
Wikipedia pathwaysOR5I1
Orthology - Evolution
OrthoDB10798
GeneTree (enSembl)ENSG00000167825
Phylogenetic Trees/Animal Genes : TreeFamOR5I1
HOVERGENQ13606
HOGENOMQ13606
Homologs : HomoloGeneOR5I1
Homology/Alignments : Family Browser (UCSC)OR5I1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR5I1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR5I1
dbVarOR5I1
ClinVarOR5I1
1000_GenomesOR5I1 
Exome Variant ServerOR5I1
ExAC (Exome Aggregation Consortium)OR5I1 (select the gene name)
Genetic variants : HAPMAP10798
Genomic Variants (DGV)OR5I1 [DGVbeta]
DECIPHEROR5I1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR5I1 
Mutations
ICGC Data PortalOR5I1 
TCGA Data PortalOR5I1 
Broad Tumor PortalOR5I1
OASIS PortalOR5I1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR5I1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR5I1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR5I1
DgiDB (Drug Gene Interaction Database)OR5I1
DoCM (Curated mutations)OR5I1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR5I1 (select a term)
intoGenOR5I1
Cancer3DOR5I1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608496   
Orphanet
MedgenOR5I1
Genetic Testing Registry OR5I1
NextProtQ13606 [Medical]
TSGene10798
GENETestsOR5I1
Target ValidationOR5I1
Huge Navigator OR5I1 [HugePedia]
snp3D : Map Gene to Disease10798
BioCentury BCIQOR5I1
ClinGenOR5I1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD10798
Chemical/Pharm GKB GenePA32540
Clinical trialOR5I1
Miscellaneous
canSAR (ICR)OR5I1 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR5I1
EVEXOR5I1
GoPubMedOR5I1
iHOPOR5I1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:33:26 CEST 2017

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