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OR5M10 (olfactory receptor family 5 subfamily M member 10)

Identity

Alias_namesolfactory receptor, family 5, subfamily M, member 10
Other aliasOR11-207
HGNC (Hugo) OR5M10
LocusID (NCBI) 390167
Atlas_Id 71441
Location 11q12.1  [Link to chromosome band 11q12]
Location_base_pair Starts at 56576774 and ends at 56577721 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR5M10   15290
Cards
Entrez_Gene (NCBI)OR5M10  390167  olfactory receptor family 5 subfamily M member 10
AliasesOR11-207
GeneCards (Weizmann)OR5M10
Ensembl hg19 (Hinxton)ENSG00000254834 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000254834 [Gene_View]  chr11:56576774-56577721 [Contig_View]  OR5M10 [Vega]
ICGC DataPortalENSG00000254834
TCGA cBioPortalOR5M10
AceView (NCBI)OR5M10
Genatlas (Paris)OR5M10
WikiGenes390167
SOURCE (Princeton)OR5M10
Genetics Home Reference (NIH)OR5M10
Genomic and cartography
GoldenPath hg38 (UCSC)OR5M10  -     chr11:56576774-56577721 -  11q12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR5M10  -     11q12.1   [Description]    (hg19-Feb_2009)
EnsemblOR5M10 - 11q12.1 [CytoView hg19]  OR5M10 - 11q12.1 [CytoView hg38]
Mapping of homologs : NCBIOR5M10 [Mapview hg19]  OR5M10 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC140733
RefSeq transcript (Entrez)NM_001004741
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR5M10
Cluster EST : UnigeneHs.553750 [ NCBI ]
CGAP (NCI)Hs.553750
Alternative Splicing GalleryENSG00000254834
Gene ExpressionOR5M10 [ NCBI-GEO ]   OR5M10 [ EBI - ARRAY_EXPRESS ]   OR5M10 [ SEEK ]   OR5M10 [ MEM ]
Gene Expression Viewer (FireBrowse)OR5M10 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)390167
GTEX Portal (Tissue expression)OR5M10
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6IEU7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6IEU7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6IEU7
Splice isoforms : SwissVarQ6IEU7
PhosPhoSitePlusQ6IEU7
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR5M10
DMDM Disease mutations390167
Blocks (Seattle)OR5M10
SuperfamilyQ6IEU7
Human Protein AtlasENSG00000254834
Peptide AtlasQ6IEU7
HPRD15047
IPIIPI00375733   
Protein Interaction databases
DIP (DOE-UCLA)Q6IEU7
IntAct (EBI)Q6IEU7
FunCoupENSG00000254834
BioGRIDOR5M10
STRING (EMBL)OR5M10
ZODIACOR5M10
Ontologies - Pathways
QuickGOQ6IEU7
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR5M10
Atlas of Cancer Signalling NetworkOR5M10
Wikipedia pathwaysOR5M10
Orthology - Evolution
OrthoDB390167
GeneTree (enSembl)ENSG00000254834
Phylogenetic Trees/Animal Genes : TreeFamOR5M10
HOVERGENQ6IEU7
HOGENOMQ6IEU7
Homologs : HomoloGeneOR5M10
Homology/Alignments : Family Browser (UCSC)OR5M10
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR5M10 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR5M10
dbVarOR5M10
ClinVarOR5M10
1000_GenomesOR5M10 
Exome Variant ServerOR5M10
ExAC (Exome Aggregation Consortium)OR5M10 (select the gene name)
Genetic variants : HAPMAP390167
Genomic Variants (DGV)OR5M10 [DGVbeta]
DECIPHEROR5M10 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR5M10 
Mutations
ICGC Data PortalOR5M10 
TCGA Data PortalOR5M10 
Broad Tumor PortalOR5M10
OASIS PortalOR5M10 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR5M10  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR5M10
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR5M10
DgiDB (Drug Gene Interaction Database)OR5M10
DoCM (Curated mutations)OR5M10 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR5M10 (select a term)
intoGenOR5M10
Cancer3DOR5M10(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR5M10
Genetic Testing Registry OR5M10
NextProtQ6IEU7 [Medical]
TSGene390167
GENETestsOR5M10
Target ValidationOR5M10
Huge Navigator OR5M10 [HugePedia]
snp3D : Map Gene to Disease390167
BioCentury BCIQOR5M10
ClinGenOR5M10
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD390167
Chemical/Pharm GKB GenePA32547
Clinical trialOR5M10
Miscellaneous
canSAR (ICR)OR5M10 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR5M10
EVEXOR5M10
GoPubMedOR5M10
iHOPOR5M10
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:33:27 CEST 2017

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