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OR5M11 (olfactory receptor, family 5, subfamily M, member 11)

Identity

Alias_namesolfactory receptor, family 5, subfamily M, member 11
Alias_symbol (synonym)OR11-199
Other alias
HGNC (Hugo) OR5M11
LocusID (NCBI) 219487
Atlas_Id 71442
Location 11q12.1  [Link to chromosome band 11q12]
Location_base_pair Starts at 56309816 and ends at 56310733 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR5M11   15291
Cards
Entrez_Gene (NCBI)OR5M11  219487  olfactory receptor, family 5, subfamily M, member 11
AliasesOR11-199
GeneCards (Weizmann)OR5M11
Ensembl hg19 (Hinxton)ENSG00000255223 [Gene_View]  chr11:56309816-56310733 [Contig_View]  OR5M11 [Vega]
Ensembl hg38 (Hinxton)ENSG00000255223 [Gene_View]  chr11:56309816-56310733 [Contig_View]  OR5M11 [Vega]
ICGC DataPortalENSG00000255223
TCGA cBioPortalOR5M11
AceView (NCBI)OR5M11
Genatlas (Paris)OR5M11
WikiGenes219487
SOURCE (Princeton)OR5M11
Genetics Home Reference (NIH)OR5M11
Genomic and cartography
GoldenPath hg19 (UCSC)OR5M11  -     chr11:56309816-56310733 -  11q12.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)OR5M11  -     11q12.1   [Description]    (hg38-Dec_2013)
EnsemblOR5M11 - 11q12.1 [CytoView hg19]  OR5M11 - 11q12.1 [CytoView hg38]
Mapping of homologs : NCBIOR5M11 [Mapview hg19]  OR5M11 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC136951 BC136953
RefSeq transcript (Entrez)NM_001005245
RefSeq genomic (Entrez)NC_000011 NC_018922 NT_167190 NW_004929380
Consensus coding sequences : CCDS (NCBI)OR5M11
Cluster EST : UnigeneHs.553632 [ NCBI ]
CGAP (NCI)Hs.553632
Alternative Splicing GalleryENSG00000255223
Gene ExpressionOR5M11 [ NCBI-GEO ]   OR5M11 [ EBI - ARRAY_EXPRESS ]   OR5M11 [ SEEK ]   OR5M11 [ MEM ]
Gene Expression Viewer (FireBrowse)OR5M11 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)219487
GTEX Portal (Tissue expression)OR5M11
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96RB7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96RB7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96RB7
Splice isoforms : SwissVarQ96RB7
PhosPhoSitePlusQ96RB7
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR5M11
DMDM Disease mutations219487
Blocks (Seattle)OR5M11
SuperfamilyQ96RB7
Human Protein AtlasENSG00000255223
Peptide AtlasQ96RB7
HPRD17766
IPIIPI00332085   
Protein Interaction databases
DIP (DOE-UCLA)Q96RB7
IntAct (EBI)Q96RB7
FunCoupENSG00000255223
BioGRIDOR5M11
STRING (EMBL)OR5M11
ZODIACOR5M11
Ontologies - Pathways
QuickGOQ96RB7
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  integral component of plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  detection of chemical stimulus involved in sensory perception of smell  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  integral component of plasma membrane  G-protein coupled receptor signaling pathway  sensory perception of smell  detection of chemical stimulus involved in sensory perception of smell  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR5M11
Atlas of Cancer Signalling NetworkOR5M11
Wikipedia pathwaysOR5M11
Orthology - Evolution
OrthoDB219487
GeneTree (enSembl)ENSG00000255223
Phylogenetic Trees/Animal Genes : TreeFamOR5M11
HOVERGENQ96RB7
HOGENOMQ96RB7
Homologs : HomoloGeneOR5M11
Homology/Alignments : Family Browser (UCSC)OR5M11
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR5M11 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR5M11
dbVarOR5M11
ClinVarOR5M11
1000_GenomesOR5M11 
Exome Variant ServerOR5M11
ExAC (Exome Aggregation Consortium)OR5M11 (select the gene name)
Genetic variants : HAPMAP219487
Genomic Variants (DGV)OR5M11 [DGVbeta]
DECIPHER (Syndromes)11:56309816-56310733  ENSG00000255223
CONAN: Copy Number AnalysisOR5M11 
Mutations
ICGC Data PortalOR5M11 
TCGA Data PortalOR5M11 
Broad Tumor PortalOR5M11
OASIS PortalOR5M11 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR5M11  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR5M11
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR5M11
DgiDB (Drug Gene Interaction Database)OR5M11
DoCM (Curated mutations)OR5M11 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR5M11 (select a term)
intoGenOR5M11
Cancer3DOR5M11(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR5M11
Genetic Testing Registry OR5M11
NextProtQ96RB7 [Medical]
TSGene219487
GENETestsOR5M11
Huge Navigator OR5M11 [HugePedia]
snp3D : Map Gene to Disease219487
BioCentury BCIQOR5M11
ClinGenOR5M11
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD219487
Chemical/Pharm GKB GenePA32548
Clinical trialOR5M11
Miscellaneous
canSAR (ICR)OR5M11 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR5M11
EVEXOR5M11
GoPubMedOR5M11
iHOPOR5M11
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:37:03 CET 2017

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