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OR5M3 (olfactory receptor family 5 subfamily M member 3)

Identity

Alias_namesolfactory receptor, family 5, subfamily M, member 3
Other aliasOR11-191
HGNC (Hugo) OR5M3
LocusID (NCBI) 219482
Atlas_Id 71443
Location 11q12.1  [Link to chromosome band 11q12]
Location_base_pair Starts at 56469488 and ends at 56470538 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR5M3   14806
Cards
Entrez_Gene (NCBI)OR5M3  219482  olfactory receptor family 5 subfamily M member 3
AliasesOR11-191
GeneCards (Weizmann)OR5M3
Ensembl hg19 (Hinxton)ENSG00000174937 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000174937 [Gene_View]  chr11:56469488-56470538 [Contig_View]  OR5M3 [Vega]
ICGC DataPortalENSG00000174937
TCGA cBioPortalOR5M3
AceView (NCBI)OR5M3
Genatlas (Paris)OR5M3
WikiGenes219482
SOURCE (Princeton)OR5M3
Genetics Home Reference (NIH)OR5M3
Genomic and cartography
GoldenPath hg38 (UCSC)OR5M3  -     chr11:56469488-56470538 -  11q12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR5M3  -     11q12.1   [Description]    (hg19-Feb_2009)
EnsemblOR5M3 - 11q12.1 [CytoView hg19]  OR5M3 - 11q12.1 [CytoView hg38]
Mapping of homologs : NCBIOR5M3 [Mapview hg19]  OR5M3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC136982 BC136983
RefSeq transcript (Entrez)NM_001004742
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR5M3
Cluster EST : UnigeneHs.553631 [ NCBI ]
CGAP (NCI)Hs.553631
Alternative Splicing GalleryENSG00000174937
Gene ExpressionOR5M3 [ NCBI-GEO ]   OR5M3 [ EBI - ARRAY_EXPRESS ]   OR5M3 [ SEEK ]   OR5M3 [ MEM ]
Gene Expression Viewer (FireBrowse)OR5M3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)219482
GTEX Portal (Tissue expression)OR5M3
Human Protein AtlasENSG00000174937-OR5M3 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGP4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGP4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGP4
Splice isoforms : SwissVarQ8NGP4
PhosPhoSitePlusQ8NGP4
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR5M3
DMDM Disease mutations219482
Blocks (Seattle)OR5M3
SuperfamilyQ8NGP4
Human Protein Atlas [tissue]ENSG00000174937-OR5M3 [tissue]
Peptide AtlasQ8NGP4
HPRD17767
IPIIPI00940827   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGP4
IntAct (EBI)Q8NGP4
FunCoupENSG00000174937
BioGRIDOR5M3
STRING (EMBL)OR5M3
ZODIACOR5M3
Ontologies - Pathways
QuickGOQ8NGP4
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR5M3
Atlas of Cancer Signalling NetworkOR5M3
Wikipedia pathwaysOR5M3
Orthology - Evolution
OrthoDB219482
GeneTree (enSembl)ENSG00000174937
Phylogenetic Trees/Animal Genes : TreeFamOR5M3
HOVERGENQ8NGP4
HOGENOMQ8NGP4
Homologs : HomoloGeneOR5M3
Homology/Alignments : Family Browser (UCSC)OR5M3
Gene fusions - Rearrangements
Tumor Fusion PortalOR5M3
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR5M3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR5M3
dbVarOR5M3
ClinVarOR5M3
1000_GenomesOR5M3 
Exome Variant ServerOR5M3
ExAC (Exome Aggregation Consortium)ENSG00000174937
GNOMAD BrowserENSG00000174937
Genetic variants : HAPMAP219482
Genomic Variants (DGV)OR5M3 [DGVbeta]
DECIPHEROR5M3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR5M3 
Mutations
ICGC Data PortalOR5M3 
TCGA Data PortalOR5M3 
Broad Tumor PortalOR5M3
OASIS PortalOR5M3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR5M3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR5M3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR5M3
DgiDB (Drug Gene Interaction Database)OR5M3
DoCM (Curated mutations)OR5M3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR5M3 (select a term)
intoGenOR5M3
Cancer3DOR5M3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETOR5M3
MedgenOR5M3
Genetic Testing Registry OR5M3
NextProtQ8NGP4 [Medical]
TSGene219482
GENETestsOR5M3
Target ValidationOR5M3
Huge Navigator OR5M3 [HugePedia]
snp3D : Map Gene to Disease219482
BioCentury BCIQOR5M3
ClinGenOR5M3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD219482
Chemical/Pharm GKB GenePA32553
Clinical trialOR5M3
Miscellaneous
canSAR (ICR)OR5M3 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR5M3
EVEXOR5M3
GoPubMedOR5M3
iHOPOR5M3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:24:47 CET 2017

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