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OR5M8 (olfactory receptor family 5 subfamily M member 8)

Identity

Alias_namesolfactory receptor, family 5, subfamily M, member 8
Other aliasOR11-194
HGNC (Hugo) OR5M8
LocusID (NCBI) 219484
Atlas_Id 71444
Location 11q12.1  [Link to chromosome band 11q12]
Location_base_pair Starts at 56490435 and ends at 56491370 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR5M8   14846
Cards
Entrez_Gene (NCBI)OR5M8  219484  olfactory receptor family 5 subfamily M member 8
AliasesOR11-194
GeneCards (Weizmann)OR5M8
Ensembl hg19 (Hinxton)ENSG00000181371 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000181371 [Gene_View]  chr11:56490435-56491370 [Contig_View]  OR5M8 [Vega]
ICGC DataPortalENSG00000181371
TCGA cBioPortalOR5M8
AceView (NCBI)OR5M8
Genatlas (Paris)OR5M8
WikiGenes219484
SOURCE (Princeton)OR5M8
Genetics Home Reference (NIH)OR5M8
Genomic and cartography
GoldenPath hg38 (UCSC)OR5M8  -     chr11:56490435-56491370 -  11q12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR5M8  -     11q12.1   [Description]    (hg19-Feb_2009)
EnsemblOR5M8 - 11q12.1 [CytoView hg19]  OR5M8 - 11q12.1 [CytoView hg38]
Mapping of homologs : NCBIOR5M8 [Mapview hg19]  OR5M8 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC136978 BC136980
RefSeq transcript (Entrez)NM_001005282
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR5M8
Cluster EST : UnigeneHs.554522 [ NCBI ]
CGAP (NCI)Hs.554522
Alternative Splicing GalleryENSG00000181371
Gene ExpressionOR5M8 [ NCBI-GEO ]   OR5M8 [ EBI - ARRAY_EXPRESS ]   OR5M8 [ SEEK ]   OR5M8 [ MEM ]
Gene Expression Viewer (FireBrowse)OR5M8 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)219484
GTEX Portal (Tissue expression)OR5M8
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGP6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGP6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGP6
Splice isoforms : SwissVarQ8NGP6
PhosPhoSitePlusQ8NGP6
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR5M8
DMDM Disease mutations219484
Blocks (Seattle)OR5M8
SuperfamilyQ8NGP6
Human Protein AtlasENSG00000181371
Peptide AtlasQ8NGP6
HPRD17768
IPIIPI00303582   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGP6
IntAct (EBI)Q8NGP6
FunCoupENSG00000181371
BioGRIDOR5M8
STRING (EMBL)OR5M8
ZODIACOR5M8
Ontologies - Pathways
QuickGOQ8NGP6
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR5M8
Atlas of Cancer Signalling NetworkOR5M8
Wikipedia pathwaysOR5M8
Orthology - Evolution
OrthoDB219484
GeneTree (enSembl)ENSG00000181371
Phylogenetic Trees/Animal Genes : TreeFamOR5M8
HOVERGENQ8NGP6
HOGENOMQ8NGP6
Homologs : HomoloGeneOR5M8
Homology/Alignments : Family Browser (UCSC)OR5M8
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR5M8 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR5M8
dbVarOR5M8
ClinVarOR5M8
1000_GenomesOR5M8 
Exome Variant ServerOR5M8
ExAC (Exome Aggregation Consortium)OR5M8 (select the gene name)
Genetic variants : HAPMAP219484
Genomic Variants (DGV)OR5M8 [DGVbeta]
DECIPHEROR5M8 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR5M8 
Mutations
ICGC Data PortalOR5M8 
TCGA Data PortalOR5M8 
Broad Tumor PortalOR5M8
OASIS PortalOR5M8 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR5M8  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR5M8
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR5M8
DgiDB (Drug Gene Interaction Database)OR5M8
DoCM (Curated mutations)OR5M8 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR5M8 (select a term)
intoGenOR5M8
Cancer3DOR5M8(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR5M8
Genetic Testing Registry OR5M8
NextProtQ8NGP6 [Medical]
TSGene219484
GENETestsOR5M8
Target ValidationOR5M8
Huge Navigator OR5M8 [HugePedia]
snp3D : Map Gene to Disease219484
BioCentury BCIQOR5M8
ClinGenOR5M8
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD219484
Chemical/Pharm GKB GenePA32558
Clinical trialOR5M8
Miscellaneous
canSAR (ICR)OR5M8 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR5M8
EVEXOR5M8
GoPubMedOR5M8
iHOPOR5M8
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:33:27 CEST 2017

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