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OR5M9 (olfactory receptor family 5 subfamily M member 9)

Identity

Alias_namesolfactory receptor, family 5, subfamily M, member 9
Other aliasOR11-190
HGNC (Hugo) OR5M9
LocusID (NCBI) 390162
Atlas_Id 71445
Location 11q12.1  [Link to chromosome band 11q12]
Location_base_pair Starts at 56462469 and ends at 56463401 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR5M9   15294
Cards
Entrez_Gene (NCBI)OR5M9  390162  olfactory receptor family 5 subfamily M member 9
AliasesOR11-190
GeneCards (Weizmann)OR5M9
Ensembl hg19 (Hinxton)ENSG00000150269 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000150269 [Gene_View]  chr11:56462469-56463401 [Contig_View]  OR5M9 [Vega]
ICGC DataPortalENSG00000150269
TCGA cBioPortalOR5M9
AceView (NCBI)OR5M9
Genatlas (Paris)OR5M9
WikiGenes390162
SOURCE (Princeton)OR5M9
Genetics Home Reference (NIH)OR5M9
Genomic and cartography
GoldenPath hg38 (UCSC)OR5M9  -     chr11:56462469-56463401 -  11q12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR5M9  -     11q12.1   [Description]    (hg19-Feb_2009)
EnsemblOR5M9 - 11q12.1 [CytoView hg19]  OR5M9 - 11q12.1 [CytoView hg38]
Mapping of homologs : NCBIOR5M9 [Mapview hg19]  OR5M9 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC140458 BC148707
RefSeq transcript (Entrez)NM_001004743
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR5M9
Cluster EST : UnigeneHs.553749 [ NCBI ]
CGAP (NCI)Hs.553749
Alternative Splicing GalleryENSG00000150269
Gene ExpressionOR5M9 [ NCBI-GEO ]   OR5M9 [ EBI - ARRAY_EXPRESS ]   OR5M9 [ SEEK ]   OR5M9 [ MEM ]
Gene Expression Viewer (FireBrowse)OR5M9 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)390162
GTEX Portal (Tissue expression)OR5M9
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NGP3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NGP3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NGP3
Splice isoforms : SwissVarQ8NGP3
PhosPhoSitePlusQ8NGP3
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR5M9
DMDM Disease mutations390162
Blocks (Seattle)OR5M9
SuperfamilyQ8NGP3
Human Protein AtlasENSG00000150269
Peptide AtlasQ8NGP3
HPRD15048
IPIIPI00169077   
Protein Interaction databases
DIP (DOE-UCLA)Q8NGP3
IntAct (EBI)Q8NGP3
FunCoupENSG00000150269
BioGRIDOR5M9
STRING (EMBL)OR5M9
ZODIACOR5M9
Ontologies - Pathways
QuickGOQ8NGP3
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR5M9
Atlas of Cancer Signalling NetworkOR5M9
Wikipedia pathwaysOR5M9
Orthology - Evolution
OrthoDB390162
GeneTree (enSembl)ENSG00000150269
Phylogenetic Trees/Animal Genes : TreeFamOR5M9
HOVERGENQ8NGP3
HOGENOMQ8NGP3
Homologs : HomoloGeneOR5M9
Homology/Alignments : Family Browser (UCSC)OR5M9
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR5M9 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR5M9
dbVarOR5M9
ClinVarOR5M9
1000_GenomesOR5M9 
Exome Variant ServerOR5M9
ExAC (Exome Aggregation Consortium)OR5M9 (select the gene name)
Genetic variants : HAPMAP390162
Genomic Variants (DGV)OR5M9 [DGVbeta]
DECIPHEROR5M9 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR5M9 
Mutations
ICGC Data PortalOR5M9 
TCGA Data PortalOR5M9 
Broad Tumor PortalOR5M9
OASIS PortalOR5M9 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR5M9  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR5M9
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR5M9
DgiDB (Drug Gene Interaction Database)OR5M9
DoCM (Curated mutations)OR5M9 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR5M9 (select a term)
intoGenOR5M9
Cancer3DOR5M9(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR5M9
Genetic Testing Registry OR5M9
NextProtQ8NGP3 [Medical]
TSGene390162
GENETestsOR5M9
Target ValidationOR5M9
Huge Navigator OR5M9 [HugePedia]
snp3D : Map Gene to Disease390162
BioCentury BCIQOR5M9
ClinGenOR5M9
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD390162
Chemical/Pharm GKB GenePA32559
Clinical trialOR5M9
Miscellaneous
canSAR (ICR)OR5M9 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR5M9
EVEXOR5M9
GoPubMedOR5M9
iHOPOR5M9
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:34:48 CEST 2017

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