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OR5P3 (olfactory receptor family 5 subfamily P member 3)

Identity

Alias_namesolfactory receptor, family 5, subfamily P, member 3
Alias_symbol (synonym)JCG1
Other alias
HGNC (Hugo) OR5P3
LocusID (NCBI) 120066
Atlas_Id 71447
Location 11p15.4  [Link to chromosome band 11p15]
Location_base_pair Starts at 7825037 and ends at 7825972 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR5P3   14784
Cards
Entrez_Gene (NCBI)OR5P3  120066  olfactory receptor family 5 subfamily P member 3
AliasesJCG1
GeneCards (Weizmann)OR5P3
Ensembl hg19 (Hinxton)ENSG00000182334 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000182334 [Gene_View]  chr11:7825037-7825972 [Contig_View]  OR5P3 [Vega]
ICGC DataPortalENSG00000182334
TCGA cBioPortalOR5P3
AceView (NCBI)OR5P3
Genatlas (Paris)OR5P3
WikiGenes120066
SOURCE (Princeton)OR5P3
Genetics Home Reference (NIH)OR5P3
Genomic and cartography
GoldenPath hg38 (UCSC)OR5P3  -     chr11:7825037-7825972 -  11p15.4   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR5P3  -     11p15.4   [Description]    (hg19-Feb_2009)
EnsemblOR5P3 - 11p15.4 [CytoView hg19]  OR5P3 - 11p15.4 [CytoView hg38]
Mapping of homologs : NCBIOR5P3 [Mapview hg19]  OR5P3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF158377 BC141521
RefSeq transcript (Entrez)NM_153445
RefSeq genomic (Entrez)NC_000011 NC_018922 NT_187583 NW_011332695
Consensus coding sequences : CCDS (NCBI)OR5P3
Cluster EST : UnigeneHs.351825 [ NCBI ]
CGAP (NCI)Hs.351825
Alternative Splicing GalleryENSG00000182334
Gene ExpressionOR5P3 [ NCBI-GEO ]   OR5P3 [ EBI - ARRAY_EXPRESS ]   OR5P3 [ SEEK ]   OR5P3 [ MEM ]
Gene Expression Viewer (FireBrowse)OR5P3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)120066
GTEX Portal (Tissue expression)OR5P3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8WZ94   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8WZ94  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8WZ94
Splice isoforms : SwissVarQ8WZ94
PhosPhoSitePlusQ8WZ94
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR5P3
DMDM Disease mutations120066
Blocks (Seattle)OR5P3
SuperfamilyQ8WZ94
Human Protein AtlasENSG00000182334
Peptide AtlasQ8WZ94
HPRD17770
IPIIPI00103899   
Protein Interaction databases
DIP (DOE-UCLA)Q8WZ94
IntAct (EBI)Q8WZ94
FunCoupENSG00000182334
BioGRIDOR5P3
STRING (EMBL)OR5P3
ZODIACOR5P3
Ontologies - Pathways
QuickGOQ8WZ94
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  odorant binding  plasma membrane  G-protein coupled receptor signaling pathway  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR5P3
Atlas of Cancer Signalling NetworkOR5P3
Wikipedia pathwaysOR5P3
Orthology - Evolution
OrthoDB120066
GeneTree (enSembl)ENSG00000182334
Phylogenetic Trees/Animal Genes : TreeFamOR5P3
HOVERGENQ8WZ94
HOGENOMQ8WZ94
Homologs : HomoloGeneOR5P3
Homology/Alignments : Family Browser (UCSC)OR5P3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR5P3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR5P3
dbVarOR5P3
ClinVarOR5P3
1000_GenomesOR5P3 
Exome Variant ServerOR5P3
ExAC (Exome Aggregation Consortium)OR5P3 (select the gene name)
Genetic variants : HAPMAP120066
Genomic Variants (DGV)OR5P3 [DGVbeta]
DECIPHEROR5P3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR5P3 
Mutations
ICGC Data PortalOR5P3 
TCGA Data PortalOR5P3 
Broad Tumor PortalOR5P3
OASIS PortalOR5P3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR5P3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR5P3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR5P3
DgiDB (Drug Gene Interaction Database)OR5P3
DoCM (Curated mutations)OR5P3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR5P3 (select a term)
intoGenOR5P3
Cancer3DOR5P3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenOR5P3
Genetic Testing Registry OR5P3
NextProtQ8WZ94 [Medical]
TSGene120066
GENETestsOR5P3
Target ValidationOR5P3
Huge Navigator OR5P3 [HugePedia]
snp3D : Map Gene to Disease120066
BioCentury BCIQOR5P3
ClinGenOR5P3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD120066
Chemical/Pharm GKB GenePA32562
Clinical trialOR5P3
Miscellaneous
canSAR (ICR)OR5P3 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR5P3
EVEXOR5P3
GoPubMedOR5P3
iHOPOR5P3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:34:48 CEST 2017

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