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OR6A2 (olfactory receptor family 6 subfamily A member 2)

Identity

Alias_namesOR6A2P
OR6A1
olfactory receptor, family 6, subfamily A, member 2
Alias_symbol (synonym)OR11-55
Other aliasI7
HGNC (Hugo) OR6A2
LocusID (NCBI) 8590
Atlas_Id 71454
Location 11p15.4  [Link to chromosome band 11p15]
Location_base_pair Starts at 6794525 and ends at 6795908 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)OR6A2   15301
Cards
Entrez_Gene (NCBI)OR6A2  8590  olfactory receptor family 6 subfamily A member 2
AliasesI7; OR11-55; OR6A1; OR6A2P
GeneCards (Weizmann)OR6A2
Ensembl hg19 (Hinxton)ENSG00000184933 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000184933 [Gene_View]  chr11:6794525-6795908 [Contig_View]  OR6A2 [Vega]
ICGC DataPortalENSG00000184933
TCGA cBioPortalOR6A2
AceView (NCBI)OR6A2
Genatlas (Paris)OR6A2
WikiGenes8590
SOURCE (Princeton)OR6A2
Genetics Home Reference (NIH)OR6A2
Genomic and cartography
GoldenPath hg38 (UCSC)OR6A2  -     chr11:6794525-6795908 -  11p15.4   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)OR6A2  -     11p15.4   [Description]    (hg19-Feb_2009)
EnsemblOR6A2 - 11p15.4 [CytoView hg19]  OR6A2 - 11p15.4 [CytoView hg38]
Mapping of homologs : NCBIOR6A2 [Mapview hg19]  OR6A2 [Mapview hg38]
OMIM608495   
Gene and transcription
Genbank (Entrez)BC101489 BC101491
RefSeq transcript (Entrez)NM_003696
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)OR6A2
Cluster EST : UnigeneHs.652252 [ NCBI ]
CGAP (NCI)Hs.652252
Alternative Splicing GalleryENSG00000184933
Gene ExpressionOR6A2 [ NCBI-GEO ]   OR6A2 [ EBI - ARRAY_EXPRESS ]   OR6A2 [ SEEK ]   OR6A2 [ MEM ]
Gene Expression Viewer (FireBrowse)OR6A2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)8590
GTEX Portal (Tissue expression)OR6A2
Protein : pattern, domain, 3D structure
UniProt/SwissProtO95222   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO95222  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO95222
Splice isoforms : SwissVarO95222
PhosPhoSitePlusO95222
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)GPCR_Rhodpsn    GPCR_Rhodpsn_7TM    Olfact_rcpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)OR6A2
DMDM Disease mutations8590
Blocks (Seattle)OR6A2
SuperfamilyO95222
Human Protein AtlasENSG00000184933
Peptide AtlasO95222
HPRD09771
IPIIPI00029412   
Protein Interaction databases
DIP (DOE-UCLA)O95222
IntAct (EBI)O95222
FunCoupENSG00000184933
BioGRIDOR6A2
STRING (EMBL)OR6A2
ZODIACOR6A2
Ontologies - Pathways
QuickGOO95222
Ontology : AmiGOG-protein coupled receptor activity  olfactory receptor activity  olfactory receptor activity  plasma membrane  signal transduction  G-protein coupled receptor signaling pathway  sensory perception of smell  sensory perception of smell  integral component of membrane  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Ontology : EGO-EBIG-protein coupled receptor activity  olfactory receptor activity  olfactory receptor activity  plasma membrane  signal transduction  G-protein coupled receptor signaling pathway  sensory perception of smell  sensory perception of smell  integral component of membrane  integral component of membrane  detection of chemical stimulus involved in sensory perception of smell  
Pathways : KEGGOlfactory transduction   
NDEx NetworkOR6A2
Atlas of Cancer Signalling NetworkOR6A2
Wikipedia pathwaysOR6A2
Orthology - Evolution
OrthoDB8590
GeneTree (enSembl)ENSG00000184933
Phylogenetic Trees/Animal Genes : TreeFamOR6A2
HOVERGENO95222
HOGENOMO95222
Homologs : HomoloGeneOR6A2
Homology/Alignments : Family Browser (UCSC)OR6A2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerOR6A2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)OR6A2
dbVarOR6A2
ClinVarOR6A2
1000_GenomesOR6A2 
Exome Variant ServerOR6A2
ExAC (Exome Aggregation Consortium)OR6A2 (select the gene name)
Genetic variants : HAPMAP8590
Genomic Variants (DGV)OR6A2 [DGVbeta]
DECIPHEROR6A2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisOR6A2 
Mutations
ICGC Data PortalOR6A2 
TCGA Data PortalOR6A2 
Broad Tumor PortalOR6A2
OASIS PortalOR6A2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICOR6A2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDOR6A2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch OR6A2
DgiDB (Drug Gene Interaction Database)OR6A2
DoCM (Curated mutations)OR6A2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)OR6A2 (select a term)
intoGenOR6A2
Cancer3DOR6A2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608495   
Orphanet
MedgenOR6A2
Genetic Testing Registry OR6A2
NextProtO95222 [Medical]
TSGene8590
GENETestsOR6A2
Target ValidationOR6A2
Huge Navigator OR6A2 [HugePedia]
snp3D : Map Gene to Disease8590
BioCentury BCIQOR6A2
ClinGenOR6A2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD8590
Chemical/Pharm GKB GenePA32574
Clinical trialOR6A2
Miscellaneous
canSAR (ICR)OR6A2 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineOR6A2
EVEXOR6A2
GoPubMedOR6A2
iHOPOR6A2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:33:29 CEST 2017

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